CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0197700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0197700 CB620528 - Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12)(Cytokinin oxidase 1) (CKO 1) 1e+0 At3g63440 CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6) S.X. H.G.
0.00 0.1 Os11g0145200 AK107669.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e-1 At2g23250 UGT84B2 (UDP-glucosyl transferase 84B2) S.X. H.G.
0.00 0.1 Os01g0952500 AK101721.1 - Two-component response regulator ARR9 (Responsereactor 4) 9e-7 At3g57040 ARR9 (RESPONSE REGULATOR 9) S.X. H.G.
0.00 0.1 Os01g0187600 AK109624.1 - Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12)(Cytokinin oxidase 1) (CKO 1) 2e-1 At5g41440 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.00 0.1 Os03g0293700 9631.m01795 - - 3e-1 At5g66800 unknown protein S.X. H.G.
0.00 0.1 Os05g0100500 AK071466.1 - Paired amphipathic helix protein Sin3a 3e+0 At5g65570 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
128.5 100.0 GSM116402 Seedling_BAP treated_rep2 GSE5167 Rice seedling hormone treatment
45.2 99.9 GSM421684 XOC, 96 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
44.5 99.9 GSM116401 Seedling_BAP treated_rep1 GSE5167 Rice seedling hormone treatment
27.8 99.6 GSM154942 Root_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
25.5 99.5 GSM154944 Root_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
17.9 98.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.6 98.5 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.8 98.1 GSM154943 Root_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
6.7 97.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.2 97.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 3e-64 248 Os01g0187600 AK109624.1 - Cytokinin dehydrogenase 1 precursor (EC 1.5.99.12)(Cytokinin oxidase 1) (CKO 1) 2e-1 At5g41440 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.13 5e-32 141 Os02g0220100 9630.m01163 - - 8e-1 At1g75450 CKX5 (CYTOKININ OXIDASE 5) C.G. S.X.
0.07 3e-5 52 Os01g0775400 AK101022.1 - FAD linked oxidase, N-terminal domain containingprotein 7e-8 At1g75450 CKX5 (CYTOKININ OXIDASE 5) C.G. S.X.
0.04 1e-10 69 Os08g0460600 AK109251.1 - Hypothetical protein 6e-3 At4g27310 zinc finger (B-box type) family protein C.G. S.X.
0.04 6e-10 67 Os04g0523500 9632.m04244 - - 2e-1 At5g41390 - C.G. S.X.
0.01 2e-3 46 Os03g0610700 AK121227.1 - Serpin 2e+0 At1g58007 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 36 Arabidopsis thaliana At3g63440 825519 CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6) This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. - - - C.G. S.X.
0.02 9e-2 40 Glycine max Gma.11950.3.S1_at BE346131 - - 6e-15 At3g07260 forkhead-associated domain-containing protein / FHA domain-containing protein C.G. S.X.
0.05 8e-6 52 Hordeum vulgare Contig25363_at Contig25363 cytokinin dehydrogenase 2 - 3e-5 At3g63440 CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6) C.G. S.X.
0.01 1e+0 36 Populus trichocarpa PtpAffx.216607.1.S1_at pmrna31507 hypothetical protein - 3e+1 At5g26270 unknown protein C.G. S.X.
0.03 2e-2 42 Triticum aestivum Ta.8530.1.A1_at BJ306089 - - 3e-8 At1g75450 CKX5 (CYTOKININ OXIDASE 5) C.G. S.X.
0.02 5e-3 42 Vitis vinifera 1620306_at CF404552 hypothetical protein LOC100267760 - 3e-36 At1g75450 CKX5 (CYTOKININ OXIDASE 5) C.G. S.X.
0.13 7e-37 155 Zea mays Zm.209.1.A1_at AY112108.1 cytokinin oxidase1 - 9e-1 At3g63440 CKX6 (CYTOKININ OXIDASE/DEHYDROGENASE 6) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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