CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0186900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0186900 AK120573.1 - Hypothetical protein 4e-1 At3g04310 unknown protein S.X. H.G.
0.67 87.2 Os03g0107700 D64038.1 - EL2 protein 4e-1 At5g39540 - S.X. H.G.
0.47 62.3 Os06g0683400 AK111852.1 - EF-hand Ca2+-binding protein CCD1 1e+0 At5g28630 glycine-rich protein S.X. H.G.
0.44 58.1 Os04g0517100 AF467733.1 - Myb protein 1e-5 At3g12820 AtMYB10 (myb domain protein 10) S.X. H.G.
0.44 58.1 Os07g0680600 AK059307.1 - Conserved hypothetical protein 5e+0 At5g18200 UTP:galactose-1-phosphate uridylyltransferase/ ribose-5-phosphate adenylyltransferase S.X. H.G.
0.32 36.3 Os01g0582600 9629.m03821 - Conserved hypothetical protein 7e-5 At4g29780 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.6 98.6 GSM159189 Young inflorescence (P1, upto 3 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
12.2 98.3 GSM159180 Mature leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
11.7 98.2 GSM159181 Mature leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
11.6 98.2 GSM159191 Young inflorescence (P1, upto 3 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
11.3 98.2 GSM159198 Inflorescence (P4, 10 - 15 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
10.2 98.0 GSM159182 Mature leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
9.7 98.0 GSM159200 Inflorescence (P4, 10 - 15 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
9.5 97.9 GSM375766 gid1-3_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
9.0 97.8 GSM375648 Taichung 65_shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
8.8 97.8 GSM159192 Inflorescence (P2, 3 - 5 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 1e-60 236 Os05g0593000 AK064253.1 - Conserved hypothetical protein 8e-4 At4g29780 unknown protein C.G. S.X.
0.28 2e-109 397 Os02g0451900 AK061194.1 - Conserved hypothetical protein 6e-1 At3g04310 unknown protein C.G. S.X.
0.27 4e-57 224 Os01g0582600 9629.m03821 - Conserved hypothetical protein 7e-5 At4g29780 unknown protein C.G. S.X.
0.21 7e-171 601 Os12g0107300 AK073771.1 - Conserved hypothetical protein 1e+0 At3g04310 unknown protein C.G. S.X.
0.19 1e-29 133 Os05g0183900 9633.m00822 - - 3e+0 At2g28500 LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11) C.G. S.X.
0.11 2e-22 109 Os05g0184666 9633.m00828 - - 2e+0 At5g38220 hydrolase C.G. S.X.
0.08 4e-57 224 Os06g0526800 AK120510.1 - Protein phosphatase 2C family protein 7e-2 At5g24940 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-1 36 Arabidopsis thaliana At3g04310 819586 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.02 1e-1 38 Glycine max GmaAffx.75510.1.S1_at AW200973 - - 1e-4 At3g29390 RIK (RS2-Interacting KH protein) C.G. S.X.
0.20 2e-29 129 Hordeum vulgare Contig4976_at Contig4976 - - 4e+0 At5g12010 unknown protein C.G. S.X.
0.02 2e+0 34 Populus trichocarpa PtpAffx.218709.1.S1_at pmrna34431 hypothetical protein - 5e+0 At1g15800 unknown protein C.G. S.X.
0.23 2e-12 73 Triticum aestivum Ta.7143.3.S1_a_at CA730168 - - 4e+0 At1g11700 unknown protein C.G. S.X.
0.09 2e-12 71 Vitis vinifera 1619478_at CD004753 hypothetical protein LOC100247440 - 3e-9 At5g12010 unknown protein C.G. S.X.
0.28 1e-63 242 Zea mays Zm.2671.1.S1_at AW066803 - - 3e+0 At1g26150 PERK10 (PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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