CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0176700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.69 87.9 Os01g0176700 AK109808.1 - Myb, DNA-binding domain containing protein 1e-12 At2g03500 myb family transcription factor S.X. H.G.
0.38 46.9 Os10g0171400 9638.m00781 - Cytochrome P450 family protein 9e-1 At2g37480 unknown protein S.X. H.G.
0.38 46.9 Os02g0435000 9630.m02216 - Translocation protein Sec62 family protein 7e-8 At3g20920 translocation protein-related S.X. H.G.
0.30 32.7 Os01g0535100 9629.m03301 - - 4e-1 At5g03660 unknown protein S.X. H.G.
0.23 21.2 Os09g0451100 AK063736.1 - - 3e-1 At5g03210 unknown protein S.X. H.G.
0.21 17.9 Os04g0412150 9632.m03223 - - 1e+0 At3g56260 unknown protein S.X. H.G.
0.15 10.3 Os10g0415140 9638.m02343 - - 3e-1 At1g32290 unknown protein S.X. H.G.
0.14 9.3 Os05g0137500 9633.m00395 - - 1e-8 At1g68150 WRKY9 S.X. H.G.
0.13 8.2 Os04g0116900 9632.m00170 - Conserved hypothetical protein 2e-2 At5g23100 unknown protein S.X. H.G.
0.13 8.2 Os08g0235000 9636.m01357 - - 9e-1 At5g26890 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
55.6 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
36.4 99.8 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
36.1 99.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.7 99.6 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.5 99.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.5 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.8 99.2 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.9 99.1 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.6 99.1 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 4e-10 67 Os02g0325600 AK101809.1 - Phosphate starvation regulator protein (Regulatoryprotein of P- starvation acclimation response Psr1) 2e-1 At5g45580 transcription factor C.G. S.X.
0.05 3e-11 71 Os07g0119300 AK070421.1 - Myb, DNA-binding domain containing protein 2e-7 At1g68670 myb family transcription factor C.G. S.X.
0.04 3e-8 61 Os03g0764600 AK105625.1 - - 4e-9 At1g68670 myb family transcription factor C.G. S.X.
0.03 4e-4 48 Os11g0490300 9639.m02695 - Hypothetical protein 4e-3 At2g22080 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 9e-13 75 Arabidopsis thaliana At2g03500 814878 myb family transcription factor F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;OFPMBAV - - - C.G. S.X.
0.03 2e-2 42 Glycine max GmaAffx.70868.1.S1_at AW100172 - - 1e-3 At1g68670 myb family transcription factor C.G. S.X.
0.11 3e-17 89 Hordeum vulgare Contig14220_at Contig14220 - - 2e-6 At2g03500 myb family transcription factor C.G. S.X.
0.05 1e-3 46 Populus trichocarpa PtpAffx.50757.1.A1_at CV235769 hypothetical protein - 2e-13 At4g37180 myb family transcription factor C.G. S.X.
0.12 2e-13 77 Triticum aestivum TaAffx.28317.1.S1_at CA661906 - - 7e-5 At1g13300 myb family transcription factor C.G. S.X.
0.06 9e-1 34 Vitis vinifera 1620914_at BQ798443 hypothetical protein LOC100267475 - 2e-3 At1g25550 myb family transcription factor C.G. S.X.
0.03 1e-9 63 Zea mays Zm.19076.1.A1_at CO522709 hypothetical protein LOC100280246 - 2e-3 At3g25790 myb family transcription factor C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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