CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0175100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.74 91.4 Os01g0175100 AK071289.1 - Conserved hypothetical protein 2e-3 At5g35680 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative S.X. H.G.
0.48 63.7 Os02g0790500 AK066691.1 - Glycosyl transferase, family 20 domain containingprotein 3e-11 At1g68020 ATTPS6 S.X. H.G.
0.37 45.0 Os04g0679400 AK121152.1 - Conserved hypothetical protein 5e-2 At5g37550 unknown protein S.X. H.G.
0.36 44.0 Os10g0207400 AK120253.1 - Conserved hypothetical protein 4e-1 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) S.X. H.G.
0.36 44.0 Os05g0569300 AK065440.1 - G-box binding factor 1 2e-1 At2g47530 - S.X. H.G.
0.34 40.0 Os01g0314100 AK067157.1 - Catalytic domain of components of variousdehydrogenase complexes containing protein 3e-7 At3g06850 BCE2 S.X. H.G.
0.34 40.0 Os05g0344200 BI812679 - Hypothetical protein 3e+0 At2g02350 SKIP3 (SKP1 INTERACTING PARTNER 3) S.X. H.G.
0.33 38.8 Os06g0695600 AK066069.1 - Zn-finger, RING domain containing protein 4e-10 At5g24870 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.32 36.3 Os05g0176700 AK071729.1 - Conserved hypothetical protein 6e-6 At5g23100 unknown protein S.X. H.G.
0.32 36.3 Os03g0815100 AY596808.1 - OsNAC6 protein 7e-4 At1g01720 ATAF1 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.1 98.3 GSM159262 Drought stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
10.9 98.1 GSM431940 Shoot- -Fe-P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
10.5 98.1 GSM159263 Drought stress, biological rep 2 GSE6901 Expression data for stress treatment in rice seedlings
10.1 98.0 GSM159264 Drought stress, biological rep 3 GSE6901 Expression data for stress treatment in rice seedlings
9.0 97.8 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
8.4 97.7 GSM431938 Shoot- +Fe-P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
7.4 97.5 GSM431934 Shoot- +Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
7.0 97.4 GSM159190 Young inflorescence (P1, upto 3 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
6.1 97.1 GSM159191 Young inflorescence (P1, upto 3 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
5.8 97.0 GSM431937 Shoot- +Fe-P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 1e-36 155 Os05g0176700 AK071729.1 - Conserved hypothetical protein 6e-6 At5g23100 unknown protein C.G. S.X.
0.03 2e-4 48 Os01g0333000 NM_183882.1 - - 7e-1 At1g01305 unknown protein C.G. S.X.
0.03 2e-4 48 Os03g0808600 AK066615.1 - Calcium-dependent protein kinase 4e-19 At3g57530 CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32) C.G. S.X.
0.01 2e-4 48 Os08g0564800 AK071244.1 - Conserved hypothetical protein 6e-10 At1g15780 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-3 44 Arabidopsis thaliana At5g35680 833541 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative F:RNA binding, translation initiation factor activity;P:translational initiation;C:cellular_component unknown;OMAFP - - - C.G. S.X.
0.04 6e-4 46 Glycine max GmaAffx.73473.1.S1_at BM086203 - - 5e-33 At3g06820 mov34 family protein C.G. S.X.
0.16 7e-26 117 Hordeum vulgare Contig7446_at Contig7446 - - 3e-1 At4g24240 WRKY7 C.G. S.X.
0.04 2e-3 44 Populus trichocarpa PtpAffx.66664.1.S1_at CK107059 - - 8e-2 At1g29490 auxin-responsive family protein C.G. S.X.
0.26 8e-49 194 Triticum aestivum Ta.12181.2.S1_x_at CA596842 - - 1e+0 At4g09000 14-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1) C.G. S.X.
0.04 3e-5 48 Vitis vinifera 1615744_at BQ800032 - - 1e+0 At3g15630 unknown protein C.G. S.X.
0.18 2e-17 89 Zea mays Zm.10237.1.A1_at BM333587 hypothetical protein LOC100277700 - 2e-2 At3g15630 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006813 The directed movement of potassium ions (K+) into, out of, within or between cells.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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