CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0163800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0163800 NM_184495.1 - - 4e+0 At5g11550 binding S.X. H.G.
0.33 38.8 Os02g0280200 9630.m05910 - Beta-glucanase family protein 2e-3 At4g28850 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative S.X. H.G.
0.31 34.5 Os06g0563100 9634.m03495 - - 2e-1 At4g30460 glycine-rich protein S.X. H.G.
0.17 12.6 Os04g0350433 9632.m02668 - - 1e+1 At2g04690 cellular repressor of E1A-stimulated genes (CREG) family S.X. H.G.
0.04 2.0 Os07g0480500 NM_187318.1 - - 2e+0 At1g49500 unknown protein S.X. H.G.
0.02 1.0 Os12g0479200 9640.m02842 - - 4e+0 At3g61630 CRF6 (CYTOKININ RESPONSE FACTOR 6) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
52.1 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.6 99.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.5 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.1 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.9 99.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.6 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM262003 IAC165, 4 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
21.6 99.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.1 99.2 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.6 99.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.52 6e-50 198 Os01g0163100 NM_184489.1 - - 9e-1 At5g46790 unknown protein C.G. S.X.
0.43 3e-67 256 Os01g0163600 NM_184498.1 - - 2e+0 At2g20560 DNAJ heat shock family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e+0 32 Arabidopsis thaliana At5g11550 831027 binding F:binding;P:biological_process unknown;C:chloroplast;PMFOBV - - - C.G. S.X.
0.04 4e-1 36 Glycine max GmaAffx.49791.1.S1_s_at AW706268 - - 1e-2 At5g41090 anac095 (Arabidopsis NAC domain containing protein 95) C.G. S.X.
0.06 1e-1 36 Hordeum vulgare AF474072_CDS-4_at AF474072_CDS-4 - - 1e+0 At5g05810 ATL43 C.G. S.X.
0.05 1e+0 34 Populus trichocarpa PtpAffx.106310.1.A1_s_at DN487587 hypothetical protein - 1e+0 At5g03210 unknown protein C.G. S.X.
0.04 1e+0 34 Triticum aestivum TaAffx.51805.1.S1_at CA718755 - - 1e+0 At3g26420 ATRZ-1A C.G. S.X.
0.06 5e+0 30 Vitis vinifera 1617898_at CF605263 hypothetical protein LOC100244372 - 3e-1 At5g49610 F-box family protein C.G. S.X.
0.04 4e-1 34 Zea mays ZmAffx.994.1.A1_at AI855283 - - 3e+0 At5g11360 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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