Gene omics information

Query gene ID Os01g0144600
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.2Os01g0144600AK061501.1-Hypothetical protein5e-1At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)S.X.H.G.
0.5371.3Os05g0400800AK065701.1-1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase,chloroplast precursor (EC 5.3.1.16)(Phosphoribosylformimino-5-aminoimidazole carboxamideribotide isomerase) (5-proFAR isomerase) (BBM II)7e-10At2g36230APG10 (ALBINO AND PALE GREEN 10)S.X.H.G.
0.1915.1Os12g0203100CB676273-Conserved hypothetical protein4e-1At1g22800methyltransferaseS.X.H.G.
0.116.5Os09g0431500AK103717.1-Transcription initiation factor TFIID, 23-30 kDasubunit family protein1e-1At1g34419unknown proteinS.X.H.G.
0.116.5Os04g0640800AK065522.1-Programmed cell death protein 2, C-terminal domaincontaining protein8e-4At1g34790TT1 (transparent testa 1)S.X.H.G.
0.073.7Os07g0508200AK069914.1-Hypothetical protein2e-1At1g54215proline-rich family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
10.198.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
8.997.8GSM302922seedling_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
7.397.5GSM302923seedling_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
6.397.2GSM195223Ovary 3, biological rep 3GSE7951Genome-wide gene expression profiling of rice stigma
6.397.2GSM195221Ovary 1, biological rep 1GSE7951Genome-wide gene expression profiling of rice stigma
5.997.0GSM302919leaf_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
5.396.7GSM302918leaf_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
5.096.6GSM302921root_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
4.596.3GSM195222Ovary 2, biological rep 2GSE7951Genome-wide gene expression profiling of rice stigma
4.396.1GSM159272Rice coleoptiles, 4 days old, anoxic, REPLICATE 2 (Sample #12)GSE6908Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-344Os07g04387009635.m02464-TLDc domain containing protein1e-1At2g05590-C.G.S.X.
0.023e-448Os03g0185400AK121937.1-Hypothetical protein3e+0At5g54470zinc finger (B-box type) family proteinC.G.S.X.
0.016e-550Os07g0191700AK066389.1-Conserved hypothetical protein3e-24At1g07910RNL (RNA LIGASE)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e-136Arabidopsis thalianaAt5g25220832593KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia---C.G.S.X.
0.083e-344Glycine maxGmaAffx.61077.1.S1_atCA783364--2e+0At1g69880ATH8 (thioredoxin H-type 8)C.G.S.X.
0.328e-26117Hordeum vulgareContig16223_atContig16223--1e-1At5g63900PHD finger family proteinC.G.S.X.
0.047e-446Populus trichocarpaPtpAffx.48196.1.S1_s_atBU895985hypothetical protein-5e-1At5g23535KOW domain-containing proteinC.G.S.X.
0.423e-33143Triticum aestivumTaAffx.35825.1.S1_atBU100124--2e+0At5g59950RNA and export factor-binding protein, putativeC.G.S.X.
0.046e-134Vitis vinifera1619140_atCF606031hypothetical protein LOC100246049-4e-4At2g35270DNA-binding protein-relatedC.G.S.X.
0.043e-342Zea maysZm.1711.1.A1_atCO534032clathrin assembly protein-3e-1At2g34800unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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