Gene omics information

Query gene ID Os01g0142100
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os01g0142100AK065031.1-Peptidase M50 family protein1e-6At5g05740EGY2S.X.H.G.
0.8395.8Os12g0233300AK058317.1-Histidine triad (HIT) protein family protein2e+0At1g07700thioredoxin family proteinS.X.H.G.
0.6181.2Os01g0705300AK102719.1-Conserved hypothetical protein1e-1At1g60320Toll-Interleukin-Resistance (TIR) domain-containing proteinS.X.H.G.
0.4762.3Os11g0153700AK058576.1-Signal recognition particle 54 kDa protein,chloroplast precursor (SRP54) (54 chloroplast protein)(54CP) (FFC)2e-35At5g03940CPSRP54 (CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT)S.X.H.G.
0.4355.4Os05g0481000AK059369.1-Serine/threonine protein phosphatase 2B catalyticsubunit, beta isoform (EC 3.1.3.16) (Calmodulin-dependentcalcineurin A subunit, beta isoform) (CAM-PRP catalyticsubunit). Splice isoform 21e-17At1g32070ATNSI (NUCLEAR SHUTTLE INTERACTING)S.X.H.G.
0.4051.1Os03g0861700AK066129.1-Rhodanese-like domain containing protein9e-10At1g17850-S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.499.2GSM207562Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
21.399.2GSM207558Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
19.299.0GSM207563Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
19.299.0GSM207560Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
19.099.0GSM207559Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
18.999.0GSM207564Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
18.398.9GSM207565Mudanjiang8 wild type control rep1GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
15.898.7GSM207566Mudanjiang8 wild type control rep2GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
13.898.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in Musa
13.498.5GSM207567Mudanjiang8 wild type control rep3GSE8380Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.022e-346Os06g06844009634.m04581--4e-1At3g55880unknown proteinC.G.S.X.
0.012e-346Os05g0119200AK067943.1-Conserved hypothetical protein3e-2At4g36780transcription regulatorC.G.S.X.
0.013e-242Os02g0277600AK110791.1-MFDR (NADP adrenodoxin-like ferredoxin reductase)1e+0At4g32360NADP adrenodoxin-like ferredoxin reductaseC.G.S.X.
0.013e-242Os02g0681100AK100584.1-Protein of unknown function DUF604 family protein7e-8At4g23490fringe-related proteinC.G.S.X.
0.013e-242Os07g0530700AK099533.1-Conserved hypothetical protein6e-1At2g36026-C.G.S.X.
0.011e-140Os12g05909009640.m03909-Conserved hypothetical protein1e-10At4g37100catalytic/ pyridoxal phosphate bindingC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.181e-656Arabidopsis thalianaAt5g05740830458EGY2S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.---C.G.S.X.
0.174e-1067Glycine maxGma.13082.1.S1_atBE823876--9e-28At5g05740EGY2C.G.S.X.
0.261e-103377Hordeum vulgareContig5438_s_atContig5438--5e-1At5g05740EGY2C.G.S.X.
0.124e-1377Populus trichocarpaPtpAffx.556.3.A1_atBP931456hypothetical protein-1e-18At5g05740EGY2C.G.S.X.
0.228e-1479Triticum aestivumTa.9083.1.S1_atCA628292--3e-7At5g05740EGY2C.G.S.X.
0.231e-1997Vitis vinifera1621672_atCB342264hypothetical protein LOC100267324-2e-34At5g05740EGY2C.G.S.X.
0.014e-136Zea maysZm.6182.1.S1_atCF03982360S ribosomal protein L29-1e-21At3g0670060S ribosomal protein L29 (RPL29A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006508The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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