CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0138500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.61 81.2 Os01g0138500 AK073435.1 - Protein of unknown function DUF789 family protein 7e-1 At5g49220 unknown protein S.X. H.G.
0.44 58.1 Os03g0341300 9631.m02223 - MtN3 and saliva related transmembrane proteinfamily protein 4e-2 At5g13170 SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29) S.X. H.G.
0.43 55.4 Os03g0316200 AK071812.1 - WSI76 protein induced by water stress 2e-22 At1g56600 AtGolS2 (Arabidopsis thaliana galactinol synthase 2) S.X. H.G.
0.40 51.1 Os06g0147000 AK120978.1 - Conserved hypothetical protein 3e-1 At4g28830 methyltransferase/ nucleic acid binding S.X. H.G.
0.40 51.1 Os05g0457200 9633.m03549 - Protein phosphatase-2C 2e-7 At1g07430 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
0.40 51.1 Os05g0499800 AK103146.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 2e-2 At1g30530 UGT78D1 (UDP-GLUCOSYL TRANSFERASE 78D1) S.X. H.G.
0.32 36.3 Os01g0846300 AK065949.1 - Protein phpsphatase 2C (PP2C) (EC 3.1.3.16) 9e-1 At5g59220 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
50.6 99.9 GSM278855 KT95-418-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
34.9 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.5 99.7 GSM278849 WuYun3-non-infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
16.2 98.8 GSM159264 Drought stress, biological rep 3 GSE6901 Expression data for stress treatment in rice seedlings
16.2 98.8 GSM159262 Drought stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
16.1 98.7 GSM159263 Drought stress, biological rep 2 GSE6901 Expression data for stress treatment in rice seedlings
14.8 98.6 GSM278851 KT95-418-RSV infected,biological rep2 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
11.5 98.2 GSM278846 WuYun3-RSV infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
8.3 97.7 GSM278852 KT95-418-RSV infected, biological rep3 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
8.1 97.7 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 6e-3 44 Os01g0513400 AK069619.1 - Protein of unknown function DUF789 family protein 1e-3 At4g16100 unknown protein C.G. S.X.
0.04 6e-3 44 Os03g0831300 NM_185084.1 - Protein of unknown function DUF789 family protein 1e-5 At2g01260 unknown protein C.G. S.X.
0.03 4e-4 48 Os01g0306900 AK107306.1 - Protein of unknown function DUF789 family protein 8e-4 At4g16100 unknown protein C.G. S.X.
0.02 9e-2 40 Os07g0166500 9635.m00663 - - 2e-1 At4g28830 methyltransferase/ nucleic acid binding C.G. S.X.
0.01 2e-2 42 Os02g0100300 9630.m00003 - HSP associated protein like 2e-8 At4g22670 AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 7e-1 36 Arabidopsis thaliana At5g49220 834982 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO - - - C.G. S.X.
0.02 1e+0 36 Glycine max HgAffx.16532.1.S1_at CB279824 - - 2e+0 At4g16460 unknown protein C.G. S.X.
0.03 1e-3 44 Hordeum vulgare Contig19526_at Contig19526 - - 7e-1 At4g32460 - C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.120973.1.A1_at CV258367 hypothetical protein - 8e+0 At3g47543 unknown protein C.G. S.X.
0.15 3e-9 63 Triticum aestivum TaAffx.85602.1.S1_at CA621178 - - 8e-2 At1g73210 unknown protein C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1612394_at CF200899.1 - - 7e-1 At1g36580 - C.G. S.X.
0.02 1e+0 34 Zea mays Zm.12825.1.S1_at CA402807 - - 4e-2 At2g36830 GAMMA-TIP (GAMMA TONOPLAST INTRINSIC PROTEIN) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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