CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0115600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.42 53.9 Os01g0115600 AK121074.1 - LRK14 3e-1 At5g38280 PR5K S.X. H.G.
0.46 60.9 Os08g0351200 CB677679 - Plant protein of unknown function family protein 1e+1 At4g09490 RNase H domain-containing protein S.X. H.G.
0.40 51.1 Os11g0256900 CB657230 - Hypothetical protein 3e+0 At3g52070 unknown protein S.X. H.G.
0.33 38.8 Os08g0539700 AK099855.1 - PibH8 protein 5e-1 At4g07940 unknown protein S.X. H.G.
0.06 3.0 Os09g0545300 CB667155 - Auxin induced protein 6e+0 At5g42410 auxin-responsive family protein S.X. H.G.
0.04 2.0 Os11g0227700 CR282570 - RPR1 8e-2 At1g25440 zinc finger (B-box type) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
46.7 99.9 GSM159185 Y Leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
34.9 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
26.3 99.5 GSM387557 Transgenic line 4, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
22.8 99.3 GSM387559 Transgenic line 22, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
21.2 99.2 GSM387558 Transgenic line 4, biological rep. 3 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
20.3 99.1 GSM387561 Transgenic line 22, biological rep. 3 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
18.3 98.9 GSM387560 Transgenic line 22, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
12.9 98.4 GSM387563 Wild-type, biological rep. 2 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
11.9 98.3 GSM387564 Wild-type, biological rep. 3 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
11.6 98.2 GSM387562 Wild-type, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.76 0 1346 Os01g0114300 AK120121.1 - - 1e-1 At1g66910 protein kinase, putative C.G. S.X.
0.42 3e-166 587 Os01g0117500 9629.m00193 - LRK14 2e-1 At5g38280 PR5K C.G. S.X.
0.41 2e-151 537 Os01g0117300 9629.m00191 - Protein kinase domain containing protein 2e-1 At5g38280 PR5K C.G. S.X.
0.38 1e-131 472 Os01g0114700 9629.m00156 - LRK33 5e-2 At1g70250 receptor serine/threonine kinase, putative C.G. S.X.
0.37 8e-151 535 Os01g0117700 9629.m00196 - LRK14 2e-1 At5g38260 serine/threonine protein kinase, putative C.G. S.X.
0.34 3e-101 371 Os01g0113200 AF044260.1 - LRK14 2e-2 At5g38260 serine/threonine protein kinase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 38 Arabidopsis thaliana At5g38280 833810 PR5K putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase - - - C.G. S.X.
0.02 1e+0 36 Glycine max GmaAffx.55541.1.S1_at AW759258 - - 5e-30 At5g13160 PBS1 (avrPphB susceptible 1) C.G. S.X.
0.48 5e-143 508 Hordeum vulgare Contig7366_s_at Contig7366 - - 3e-1 At3g55450 protein kinase, putative C.G. S.X.
0.07 6e-3 44 Populus trichocarpa PtpAffx.224980.1.S1_at pmrna43941 hypothetical protein - 3e-2 At1g66930 serine/threonine protein kinase family protein C.G. S.X.
0.28 1e-61 238 Triticum aestivum Ta.22638.1.A1_at AY327452.1 Receptor-like kinase protein - 3e-1 At5g39030 protein kinase family protein C.G. S.X.
0.07 2e-11 69 Vitis vinifera 1607880_at BQ793902 hypothetical protein LOC100263570 - 4e-2 At2g02800 APK2B (PROTEIN KINASE 2B) C.G. S.X.
0.01 4e-1 36 Zea mays Zm.1556.1.A1_at BM079935 - - 1e-3 At1g51570 C2 domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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