CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0111100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os01g0111100 AK065672.1 - Peptidyl-prolyl cis-trans isomerase, cyclophilintype domain containing protein 2e-3 At2g27570 sulfotransferase family protein S.X. H.G.
0.71 89.6 Os01g0524500 AY151042.1 - Transcription factor MYBS3 1e-2 At5g58900 myb family transcription factor S.X. H.G.
0.71 89.6 Os02g0834700 AK061331.1 - Conserved hypothetical protein YfcH family protein 1e-8 At2g21280 SULA S.X. H.G.
0.70 88.4 Os10g0100300 AK065110.1 - Conserved hypothetical protein 2e-1 At3g18800 unknown protein S.X. H.G.
0.60 79.7 Os04g0602100 AK121197.1 - Haem peroxidase, plant/fungal/bacterial familyprotein 2e-10 At4g09010 APX4 (ASCORBATE PEROXIDASE 4) S.X. H.G.
0.58 77.0 Os07g0691200 AK072158.1 - D-alanine-D-alanine ligase B (Fragment) 1e-4 At3g08840 D-alanine--D-alanine ligase family S.X. H.G.
0.51 68.7 Os07g0469100 AK120365.1 - Thylakoid membrane phosphoprotein 14 kDa,chloroplast precursor 7e+0 At5g25240 - S.X. H.G.
0.49 64.4 Os05g0291700 AK108453.1 - Conserved hypothetical protein 7e-1 At1g79810 TED3 (REVERSAL OF THE DET PHENOTYPE 3) S.X. H.G.
0.45 58.8 Os03g0595300 AK065923.1 - Conserved hypothetical protein 1e-10 At2g05310 unknown protein S.X. H.G.
0.44 58.1 Os07g0212200 AK071575.1 - MRNA-binding protein (Fragment) 6e-20 At3g63140 CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
14.0 98.5 GSM174890 G mock 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
13.0 98.4 GSM421694 XOO, 4 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.9 98.1 GSM421674 XOC, 4 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.4 97.9 GSM431934 Shoot- +Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
8.7 97.8 GSM431940 Shoot- -Fe-P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
8.4 97.7 GSM421678 XOC, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
8.3 97.7 GSM421714 MOCK, 4 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.6 97.5 GSM431939 Shoot- -Fe-P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
7.3 97.5 GSM421718 MOCK, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.1 97.4 GSM421690 XOO, 2 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-23 111 Os12g0500400 9640.m03061 - Protein kinase domain containing protein 7e-1 At3g50330 HEC2 (HECATE 2) C.G. S.X.
0.08 1e-9 65 Os05g0358000 AK070900.1 - Drought induced 19 family protein 2e+0 At3g27040 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
0.02 1e-3 46 Os02g0225500 9630.m01216 - Conserved hypothetical protein 6e-1 At3g33293 - C.G. S.X.
0.02 1e-3 46 Os02g0225900 9630.m01220 - Conserved hypothetical protein 1e-2 At2g01430 ATHB17 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17) C.G. S.X.
0.02 1e-3 46 Os02g0516800 9630.m02991 - Homeodomain-like containing protein 6e-1 At3g06780 glycine-rich protein C.G. S.X.
0.02 5e-3 44 Os08g0129300 9636.m00268 - - 2e+0 At3g13980 unknown protein C.G. S.X.
0.01 5e-3 44 Os03g0213900 AK061935.1 - Ankyrin repeat containing protein 1e+0 At3g29390 RIK (RS2-Interacting KH protein) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-3 44 Arabidopsis thaliana At2g27570 817303 sulfotransferase family protein F:sulfotransferase activity;P:biological_process unknown;C:cellular_component unknown;MPBOF - - - C.G. S.X.
0.03 5e-2 40 Glycine max PsAffx.C125000015_at PsAffx.C125000015 - - 2e+0 At1g20590 cyclin, putative C.G. S.X.
0.11 6e-24 111 Hordeum vulgare HVSMEb0015P10r2_at HVSMEb0015P10r2 - - 3e-1 At1g03030 phosphoribulokinase/uridine kinase family protein C.G. S.X.
0.07 9e-7 56 Populus trichocarpa PtpAffx.41718.1.S1_at BU881184 hypothetical protein - 3e-12 At1g74070 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein C.G. S.X.
0.03 2e-3 44 Triticum aestivum TaAffx.83793.1.S1_at CA650974 - - 1e+0 At3g51760 unknown protein C.G. S.X.
0.11 5e-8 57 Vitis vinifera 1616857_at CF210148 hypothetical protein LOC100254249 - 7e-8 At1g74070 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein C.G. S.X.
0.02 2e-1 36 Zea mays Zm.7080.1.A1_at BM080239 hypothetical protein LOC100192783 - 2e-13 At1g57660 60S ribosomal protein L21 (RPL21E) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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