Gene omics information

Query gene ID	HgAffx.6186.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	HgAffx.6186.1.S1_at	CB826026	-	-	3e-1	At2g01080	-	S.X.	H.G.	Please select
0.44	63.3	PsAffx.C83000002_at	PsAffx.C83000002	-	-	9e-1	At3g28980	unknown protein	S.X.	H.G.	Please select
0.44	63.3	GmaAffx.1301.81.S1_at	CD401880	differentially expressed in soybean	-	5e+0	At4g22370	unknown protein	S.X.	H.G.	Please select
0.44	63.3	PsAffx.psZG005xN22f_s_at	PsAffx.psZG005xN22f	-	-	9e+0	At5g14602	unknown protein	S.X.	H.G.	Please select
0.06	9.0	GmaAffx.89500.1.A1_at	CK605776	-	-	1e+1	At5g48860	unknown protein	S.X.	H.G.	Please select
0.00	1.4	GmaAffx.79413.1.S1_at	BG882356	-	-	3e+0	At3g19580	AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
68.3	100.0	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
46.6	99.9	GSM182032	Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
35.3	99.9	GSM292222	16_C029.1B.R9B2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
34.4	99.9	GSM292448	49_C110.1G.V7G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
30.5	99.8	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
27.7	99.8	GSM292229	25_C029.1B.R9B2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
19.9	99.7	GSM293195	77_1130.1O.R082P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.9	99.7	GSM293082	81_C019.1N.R9N1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
14.1	99.6	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.2	99.5	GSM244923	6_V71.M1W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.08	1e-4	46	GmaAffx.83068.1.S1_at	BQ253795	-	-	4e+0	At3g62510	protein disulfide isomerase-related	C.G.	S.X.	Please select
0.02	2e-3	42	PsAffx.C134000033_at	PsAffx.C134000033	-	-	8e-2	At5g07560	GRP20 (GLYCINE-RICH PROTEIN 20)	C.G.	S.X.	Please select
0.01	2e-3	42	PsAffx.C1000179_at	PsAffx.C1000179	-	-	5e-1	At5g64970	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.05	7e-3	40	Gma.3216.2.S1_at	BE346231	-	-	2e-14	At2g26660	SPX2 (SPX DOMAIN GENE 2)	C.G.	S.X.	Please select
0.03	3e-2	38	PsAffx.CL346Contig1_at	PsAffx.CL346Contig1	-	-	2e-1	At2g03440	nodulin-related	C.G.	S.X.	Please select
0.03	3e-2	38	PsAffx.C89000060_at	PsAffx.C89000060	-	-	1e+1	At5g60840	unknown protein	C.G.	S.X.	Please select
0.02	1e-1	36	PsAffx.C92000037_at	PsAffx.C92000037	-	-	1e+0	At5g11900	eukaryotic translation initiation factor SUI1 family protein	C.G.	S.X.	Please select
0.03	1e-1	36	PsAffx.C95000042_at	PsAffx.C95000042	-	-	9e+0	At4g39240	kelch repeat-containing F-box family protein	C.G.	S.X.	Please select
0.01	1e-1	36	PsAffx.C34000043_at	PsAffx.C34000043	-	-	7e-2	At5g18310	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	3e-1	34	Arabidopsis thaliana	At2g01080	814636	-	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PF	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e-3	40	Hordeum vulgare	Contig19502_at	Contig19502	-	-	7e+0	At5g59613	unknown protein	C.G.	S.X.	Please select
0.05	6e-4	44	Oryza sativa	Os11g0463600	AK064625.1	-	Transcriptional activator FHA1	6e+0	Atcg00770	-	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e-1	36	Populus trichocarpa	Ptp.3942.3.S1_at	CV249512	-	-	3e-1	At5g56140	KH domain-containing protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	5e-3	40	Triticum aestivum	TaAffx.57835.1.S1_at	CA624671	-	-	9e-1	At5g27247	unknown protein	C.G.	S.X.	Please select
0.05	2e-2	36	Vitis vinifera	1617671_s_at	AY395744.1	hypothetical protein LOC100248784	-	2e-5	At3g15210	ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)	C.G.	S.X.	Please select
0.08	3e-5	46	Zea mays	Zm.1615.1.S1_at	AY106014.1	hypothetical protein LOC100279676	-	1e+0	At5g23405	high mobility group (HMG1/2) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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