Gene omics information

Query gene ID HgAffx.5776.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6HgAffx.5776.1.S1_atCB826435--1e+0At5g59030COPT1 (copper transporter 1)S.X.H.G.
0.8091.5HgAffx.11003.1.S1_atCB824101--4e+0At3g28630-S.X.H.G.
0.7790.3PsAffx.C154000024_atPsAffx.C154000024--2e-1At5g62160AtZIP12 (ZINC TRANSPORTER 12 PRECURSOR)S.X.H.G.
0.7790.3HgAffx.24315.1.S1_atCB374815--9e-1At4g15930microtubule motorS.X.H.G.
0.6786.1PsAffx.C47000085_atPsAffx.C47000085--2e+0At1g043502-oxoglutarate-dependent dioxygenase, putativeS.X.H.G.
0.6382.9PsAffx.C6000193_atPsAffx.C6000193--1e+1Atmg00450-S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1578.2100.0GSM29292395_1465.1L.R283L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
49.799.9GSM29426823_2428.2I.R297P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
41.699.9GSM201096Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stage
29.599.8GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
20.999.7GSM29321494_C042.1O.V7O1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
20.099.7GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
19.199.7GSM29319577_1130.1O.R082P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.499.4GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.999.3GSM29283818_C211.1L.SLL3L, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.699.2GSM29358012_2096.2B.R046P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.9801150HgAffx.5776.1.A1_atCB826435--1e+0At5g59030COPT1 (copper transporter 1)C.G.S.X.
0.057e-342HgAffx.10342.1.S1_atCK350753--2e+0At4g02130GATL6C.G.S.X.
0.031e-138PsAffx.psHB005xO11f_atPsAffx.psHB005xO11f--5e+0At2g21290unknown proteinC.G.S.X.
0.011e-138PsAffx.C204000031_atPsAffx.C204000031--2e-1At5g46350WRKY8C.G.S.X.
0.021e-138PsAffx.C202000015_atPsAffx.C202000015--2e+0At2g39720RHC2AC.G.S.X.
0.041e-138GmaAffx.77404.2.S1_s_atBG044600--4e-19At3g07410AtRABA5b (Arabidopsis Rab GTPase homolog A5b)C.G.S.X.
0.031e-138GmaAffx.77404.1.S1_atCD393010--3e-17At3g07410AtRABA5b (Arabidopsis Rab GTPase homolog A5b)C.G.S.X.
0.014e-136PsAffx.C169000002_atPsAffx.C169000002--1e-1At1g04370ATERF14 (Ethylene-responsive element binding factor 14)C.G.S.X.
0.024e-136PsAffx.C169000005_atPsAffx.C169000005--8e-3At5g59150ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+034Arabidopsis thalianaAt5g59030836020COPT1 (copper transporter 1)encodes a putative copper transport protein that contains copper-binding motif and functionally complements in copper-transport defective yeast strains---C.G.S.X.
0.031e-136Hordeum vulgareHM14E10r_atHM14E10r--8e-1At4g34470ASK12 (ARABIDOPSIS SKP1-LIKE 12)C.G.S.X.
0.036e-446Oryza sativaOs02g0515600AK058947.1-LPS-induced tumor necrosis factor alpha factordomain containing protein3e-2At5g13190-C.G.S.X.
0.047e+032Populus trichocarpaPtpAffx.215356.1.S1_atpmrna29497--6e-53Atcg00340-C.G.S.X.
0.035e+032Triticum aestivumTa.9223.1.A1_atBJ290167--6e+0At3g01590aldose 1-epimerase family proteinC.G.S.X.
0.046e+030Vitis vinifera1606729_atCF201225.1--6e+0At2g47115unknown proteinC.G.S.X.
0.042e+032Zea maysZm.2318.1.A1_atBM074442--9e-1At1g23710unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage