Gene omics information

Query gene ID	HgAffx.3203.1.A1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	87.8	HgAffx.3203.1.A1_at	CK350831	-	-	3e+0	At5g23760	heavy-metal-associated domain-containing protein	S.X.	H.G.	Please select
0.77	90.3	PsAffx.psMA010xD09f_at	PsAffx.psMA010xD09f	-	-	1e+0	At1g07985	Expressed protein	S.X.	H.G.	Please select
0.70	87.1	PsAffx.psHB004xH08f_at	PsAffx.psHB004xH08f	-	-	5e+0	At3g61840	unknown protein	S.X.	H.G.	Please select
0.67	86.1	GmaAffx.14602.1.S1_at	BM731566	-	-	2e-1	At3g45851	unknown protein	S.X.	H.G.	Please select
0.62	82.1	GmaAffx.14280.1.S1_at	BM095066	-	-	1e-8	At1g22710	SUC2 (SUCROSE-PROTON SYMPORTER 2)	S.X.	H.G.	Please select
0.52	73.1	GmaAffx.47834.1.A1_at	AF175392.1	-	-	3e-1	At4g16330	oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	S.X.	H.G.	Please select
0.52	73.1	HgAffx.19033.4.A1_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	S.X.	H.G.	Please select
0.40	57.1	PsAffx.C3000160_s_at	PsAffx.C3000160	-	-	4e+0	At5g42860	unknown protein	S.X.	H.G.	Please select
0.40	57.1	HgAffx.17965.1.S1_at	CB278425	-	-	2e+0	At2g23340	AP2 domain-containing transcription factor, putative	S.X.	H.G.	Please select
0.36	50.8	HgAffx.17984.1.S1_at	CB238710	-	-	3e+0	At3g24860	hydroxyproline-rich glycoprotein family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
23.4	99.8	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.1	99.5	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
7.5	98.9	GSM244807	17_CON.M2W3.CEL, Experimental replicate 3	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
7.2	98.9	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.4	98.6	GSM244833	22_VP9.M1W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
6.4	98.6	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.5	98.3	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
5.3	98.2	GSM244920	5_VP9.I5L2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
5.2	98.1	GSM293082	81_C019.1N.R9N1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.9	98.0	GSM294380	3_2464.2J.R260P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	759	HgAffx.3203.1.S1_at	CK350831	-	-	3e+0	At5g23760	heavy-metal-associated domain-containing protein	C.G.	S.X.	Please select
0.03	3e-1	36	PsAffx.C203000021_at	PsAffx.C203000021	-	-	3e+0	At1g68725	AGP19 (ARABINOGALACTAN-PROTEIN 19)	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C185000008_at	PsAffx.C185000008	-	-	1e+0	At1g30460	CPSF30	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C120000028_at	PsAffx.C120000028	-	-	1e+0	At1g29450	auxin-responsive protein, putative	C.G.	S.X.	Please select
0.03	3e-1	36	Gma.10751.2.S1_at	AW153136	-	-	4e-13	At2g42680	MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)	C.G.	S.X.	Please select
0.02	1e+0	34	PsAffx.C46000051_at	PsAffx.C46000051	-	-	6e-1	At2g22430	ATHB6	C.G.	S.X.	Please select
0.03	1e+0	34	PsAffx.C3000137_at	PsAffx.C3000137	-	-	5e+0	At3g60540	sec61beta family protein	C.G.	S.X.	Please select
0.03	1e+0	34	HgAffx.133.1.S1_at	CB825185	-	-	1e+0	At5g39950	ATTRX2 (THIOREDOXIN 2)	C.G.	S.X.	Please select
0.03	1e+0	34	Gma.13622.1.S1_at	CD401846	-	-	3e-1	At5g45620	26S proteasome regulatory subunit, putative (RPN9)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e+0	32	Arabidopsis thaliana	At5g23760	832441	heavy-metal-associated domain-containing protein	F:metal ion binding;P:metal ion transport;C:cellular_component unknown;OMPFABV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-1	34	Hordeum vulgare	Contig21617_at	Contig21617	-	-	3e-1	At4g31470	pathogenesis-related protein, putative	C.G.	S.X.	Please select
0.03	1e-1	38	Oryza sativa	Os02g0821500	9630.m05735	-	Multi antimicrobial extrusion protein MatE familyprotein	2e-9	At4g00350	MATE efflux family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e-1	36	Populus trichocarpa	PtpAffx.112242.1.S1_s_at	BP926173	hypothetical protein	-	1e-13	At3g53880	aldo/keto reductase family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	8e-1	34	Triticum aestivum	TaAffx.54114.1.S1_at	CA685641	-	-	1e+0	At5g19780	TUA5	C.G.	S.X.	Please select
0.04	4e+0	30	Vitis vinifera	1621997_s_at	CF512249	hypothetical protein LOC100259237	-	2e-1	At1g14200	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.04	5e+0	30	Zea mays	Zm.6778.2.A1_at	AI770701	-	-	8e-4	At4g27230	HTA2 (histone H2A)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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