Gene omics information

Query gene ID	HgAffx.3008.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.36	50.8	HgAffx.3008.1.S1_at	CK349682	-	-	1e-1	At3g18295	unknown protein	S.X.	H.G.	Please select
0.60	80.7	HgAffx.3851.1.A1_at	CK348839	-	-	2e+1	At5g66005	Expressed protein	S.X.	H.G.	Please select
0.50	71.7	PsAffx.C174000021_at	PsAffx.C174000021	-	-	2e-3	At1g12665	-	S.X.	H.G.	Please select
0.46	65.5	HgAffx.3584.1.A1_s_at	CK349106	-	-	2e+0	At2g37110	unknown protein	S.X.	H.G.	Please select
0.40	57.1	GmaAffx.60715.1.S1_at	BU089784	-	-	5e+0	At5g53400	nuclear movement family protein	S.X.	H.G.	Please select
0.31	42.2	PsAffx.C10000051_at	PsAffx.C10000051	-	-	1e+0	At5g09805	IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
82.3	100.0	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
64.6	99.9	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
52.1	99.9	GSM292222	16_C029.1B.R9B2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
36.0	99.9	GSM171697	32_Z.B.I.3, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
30.1	99.8	GSM294349	11_2465.2J.R186L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
26.1	99.8	GSM294377	37_2463.2J.R260U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
26.0	99.8	GSM294384	43_3179.2J.V7J3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
25.0	99.8	GSM294387	46_2439.2J.R135U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.4	99.8	GSM294431	86_2456.2J.R220P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
23.1	99.8	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	9e-3	40	PsAffx.C118000035_s_at	PsAffx.C118000035	-	-	2e+1	At5g53290	CRF3 (CYTOKININ RESPONSE FACTOR 3)	C.G.	S.X.	Please select
0.05	1e-1	36	PsAffx.CL1666Contig1_at	PsAffx.CL1666Contig1	-	-	4e+0	At5g44585	unknown protein	C.G.	S.X.	Please select
0.03	1e-1	36	PsAffx.CL1184Contig1_at	PsAffx.CL1184Contig1	-	-	1e-1	At2g39320	OTU-like cysteine protease family protein	C.G.	S.X.	Please select
0.02	1e-1	36	PsAffx.CL132Contig1_at	PsAffx.CL132Contig1	-	-	1e-2	At3g63080	ATGPX5 (glutathione peroxidase 5)	C.G.	S.X.	Please select
0.01	1e-1	36	PsAffx.C51000074_at	PsAffx.C51000074	-	-	8e+0	At5g12330	LRP1 (LATERAL ROOT PRIMORDIUM 1)	C.G.	S.X.	Please select
0.02	1e-1	36	PsAffx.C237000014_at	PsAffx.C237000014	-	-	3e-3	At1g31040	unknown protein	C.G.	S.X.	Please select
0.02	1e-1	36	PsAffx.C181000018_s_at	PsAffx.C181000018	-	-	3e+0	At1g49310	unknown protein	C.G.	S.X.	Please select
0.04	1e-1	36	PsAffx.C118000032_at	PsAffx.C118000032	-	-	1e+0	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.01	1e-1	36	PsAffx.C1000040_at	PsAffx.C1000040	-	-	2e+0	At5g25090	plastocyanin-like domain-containing protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	1e-1	36	Arabidopsis thaliana	At3g18295	821358	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	5e-2	36	Hordeum vulgare	EBro08_SQ002_H13_at	EBro08_SQ002_H13	-	-	6e-1	At3g43432	unknown protein	C.G.	S.X.	Please select
0.07	2e-1	36	Oryza sativa	OsAffx.4877.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	5e-1	34	Populus trichocarpa	PtpAffx.221658.1.S1_at	pmrna38653	hypothetical protein	-	8e-1	At1g63055	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	4e-1	34	Triticum aestivum	TaAffx.79825.1.S1_at	CA707985	-	-	4e+0	At4g18975	pentatricopeptide (PPR) repeat-containing protein	C.G.	S.X.	Please select
0.05	5e-1	32	Vitis vinifera	1620847_at	CD007365	hypothetical protein LOC100244102 /// hypothetical protein LOC100246215	-	8e-2	At1g03670	ankyrin repeat family protein	C.G.	S.X.	Please select
0.05	3e+0	30	Zea mays	ZmAffx.1145.1.A1_at	AW400072	-	-	1e-2	At1g67570	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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