Gene omics information

Query gene ID HgAffx.23839.1.S1_at
Gene name
Organism Glycine max


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.6HgAffx.23839.1.S1_atBF014010--2e-1At3g25940transcription factor S-II (TFIIS) domain-containing proteinS.X.H.G.
0.3346.1HgAffx.5648.1.S1_atCB826563--4e+0At3g26660LBD24 (LOB DOMAIN-CONTAINING PROTEIN 24)S.X.H.G.
0.1923.7PsAffx.C52000084_atPsAffx.C52000084--2e+0At5g22140pyridine nucleotide-disulphide oxidoreductase family proteinS.X.H.G.
0.1518.7HgAffx.19601.1.S1_atCA939579--4e+0At5g51845-S.X.H.G.
0.0710.2HgAffx.18004.1.S1_atCB279764--2e+0At4g13000protein kinase family proteinS.X.H.G.
0.024.5HgAffx.17965.1.S1_atCB278425--2e+0At2g23340AP2 domain-containing transcription factor, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
92.8100.0GSM29364168_2065.2B.R129U, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
14.499.6GSM29453192_2527.2K.R184L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.899.5GSM29308281_C019.1N.R9N1U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.499.5GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
10.499.3GSM2944733_3182.2K.V7K1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.399.3GSM29402879_3099.2F.V7F2L, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.199.3GSM29224252_C031.1B.V7B3U, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.199.3GSM29244849_C110.1G.V7G1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
10.099.3GSM182035Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stage
9.599.2GSM17165322_Z.E.I.3, Experimental replicate ZGSE7124Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.056e-238HgAffx.2635.1.A1_atCK350055--3e+0At5g32450RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.056e-238HgAffx.2635.1.S1_atCK350055--3e+0At5g32450RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.042e-136HgAffx.19185.1.S1_atCA939995--9e-1At3g25460F-box family proteinC.G.S.X.
0.042e-136HgAffx.14124.1.S1_atCB826176--4e+0At4g31870ATGPX7 (glutathione peroxidase 7)C.G.S.X.
0.029e-134PsAffx.C38000096_atPsAffx.C38000096--8e+0At5g61110protein binding / zinc ion bindingC.G.S.X.
0.019e-134PsAffx.C32000086_atPsAffx.C32000086--7e+0At5g45875SCRL27 (SCR-Like 27)C.G.S.X.
0.029e-134PsAffx.C23000014_atPsAffx.C23000014--5e-1At5g63250glycosyl hydrolase family protein 17C.G.S.X.
0.059e-134HgAffx.14423.1.S1_atCB299718--4e+0At5g07190ATS3 (ARABIDOPSIS THALIANA SEED GENE 3)C.G.S.X.
0.014e+032PsAffx.C39000044_atPsAffx.C39000044--1e+0At5g07130LAC13 (laccase 13)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-136Arabidopsis thalianaAt3g25940822191transcription factor S-II (TFIIS) domain-containing proteinF:transcription factor activity, transcription regulator activity, DNA binding, zinc ion binding, nucleic acid binding;P:RNA elongation, regulation of transcription, DNA-dependent, regulation of transcription;C:nucleus;MFOAPV---C.G.S.X.
0.041e+032Hordeum vulgareContig6035_s_atContig6035--8e-5At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)C.G.S.X.
0.063e-136Oryza sativaOs12g0540900AK102417.1-Tryptophanyl-tRNA synthetase (EC 6.1.1.2)(Tryptophan--tRNA ligase) (TrpRS)3e-19At3g04600tRNA synthetase class I (W and Y) family proteinC.G.S.X.
0.041e+130Populus trichocarpaPtpAffx.215701.1.S1_atpmrna30052hypothetical protein-1e+0At2g28725unknown proteinC.G.S.X.
0.041e+130Triticum aestivumTaAffx.90190.1.S1_atBQ606927--4e+0At5g12010unknown proteinC.G.S.X.
0.031e+128Vitis vinifera1619460_atCB339411--1e+0At3g55330PPL1 (PsbP-like protein 1)C.G.S.X.
0.034e+030Zea maysZm.14077.2.A1_atAY104520.1--5e+0At1g06770DRIP1 (DREB2A-INTERACTING PROTEIN 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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