Gene omics information

Query gene ID	HgAffx.22051.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	HgAffx.22051.1.S1_at	BI451507	-	-	3e+0	At4g21080	Dof-type zinc finger domain-containing protein	S.X.	H.G.	Please select
0.57	78.8	GmaAffx.44083.1.S1_at	AW706894	-	-	2e+0	Atmg00220	-	S.X.	H.G.	Please select
0.27	35.7	Gma.4375.1.S1_at	AF363021.1	cytosolic glutamine synthetase beta2	-	6e-30	At5g37600	ATGSR1	S.X.	H.G.	Please select
0.15	18.7	HgAffx.8369.1.S1_at	CB380132	-	-	9e-1	At5g67000	DNA binding / transcription factor	S.X.	H.G.	Please select
0.01	3.4	Gma.5387.1.S1_at	BM093934	-	-	2e+0	Atmg01400	-	S.X.	H.G.	Please select
0.01	3.4	Gma.6472.1.S1_at	BM091717	-	-	1e+0	At4g18620	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
29.5	99.8	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.7	99.8	GSM191075	Soybean_Cotyledon_EP1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
21.0	99.7	GSM201099	Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
20.5	99.7	GSM294423	79_2455.2J.R220L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
20.3	99.7	GSM201112	Laser capture microdissected (LCM) cotyledon adaxial epidermis at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
19.3	99.7	GSM191076	Soybean_Cotyledon_EP2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
19.2	99.7	GSM201114	Laser capture microdissected (LCM) cotyledon adaxial parenchyma at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
18.8	99.7	GSM191084	Soybean_Cotyledon_EPD2	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
17.5	99.7	GSM147949	Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
17.3	99.7	GSM201106	Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	34	PsAffx.C7000002_at	PsAffx.C7000002	-	-	3e+0	At1g16510	auxin-responsive family protein	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C52000037_at	PsAffx.C52000037	-	-	2e-1	At5g01660	-	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C5000220_s_at	PsAffx.C5000220	-	-	3e-10	At3g53610	ATRAB8	C.G.	S.X.	Please select
0.01	1e+0	34	PsAffx.C123000027_at	PsAffx.C123000027	-	-	1e-1	At5g05990	mitochondrial glycoprotein family protein / MAM33 family protein	C.G.	S.X.	Please select
0.03	1e+0	34	PsAffx.C102000009_at	PsAffx.C102000009	-	-	1e-1	At5g44550	integral membrane family protein	C.G.	S.X.	Please select
0.04	1e+0	34	HgAffx.6044.1.S1_at	CD749032	-	-	3e-1	At1g52740	HTA9 (HISTONE H2A PROTEIN 9)	C.G.	S.X.	Please select
0.03	1e+0	34	GmaAffx.2924.2.S1_at	AW666320	-	-	7e+0	At5g38060	unknown protein	C.G.	S.X.	Please select
0.03	4e+0	32	HgAffx.24300.1.S1_at	CB824907	-	-	2e+0	At3g45820	unknown protein	C.G.	S.X.	Please select
0.04	4e+0	32	HgAffx.20940.1.A1_at	CK349057	-	-	3e+0	At5g26060	S1 self-incompatibility protein-related	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e+0	32	Arabidopsis thaliana	At4g21080	827855	Dof-type zinc finger domain-containing protein	F:transcription factor activity, DNA binding;P:regulation of transcription;C:unknown;PO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e+0	30	Hordeum vulgare	HS18H24u_at	HS18H24u	-	-	5e+0	At5g07580	DNA binding / transcription factor	C.G.	S.X.	Please select
0.06	1e+0	34	Oryza sativa	OsAffx.26841.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	4e+0	32	Populus trichocarpa	PtpAffx.97335.1.A1_at	CK089888	-	-	6e-1	At3g15510	ATNAC2 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	2e-1	36	Triticum aestivum	Ta.13076.1.S1_at	CA486547	-	-	7e-1	At3g61110	ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)	C.G.	S.X.	Please select
0.03	2e-1	34	Vitis vinifera	1618598_at	CB003965	-	-	1e+0	At3g54530	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	32	Zea mays	Zm.15222.1.A1_a_at	BM347513	-	-	4e+0	At2g38750	ANNAT4 (ANNEXIN ARABIDOPSIS 4)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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