Gene omics information

Query gene ID	HgAffx.21607.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	HgAffx.21607.1.S1_at	CB299497	-	-	5e+0	At5g16200	50S ribosomal protein-related	S.X.	H.G.	Please select
0.55	76.3	PsAffx.psHB004xH08f_at	PsAffx.psHB004xH08f	-	-	5e+0	At3g61840	unknown protein	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.14602.1.S1_at	BM731566	-	-	2e-1	At3g45851	unknown protein	S.X.	H.G.	Please select
0.40	57.1	HgAffx.17965.1.S1_at	CB278425	-	-	2e+0	At2g23340	AP2 domain-containing transcription factor, putative	S.X.	H.G.	Please select
0.03	5.8	GmaAffx.83815.1.S1_s_at	BG404904	-	-	1e+0	At1g04330	unknown protein	S.X.	H.G.	Please select
0.03	5.8	Gma.1143.1.A1_at	AW278604	-	-	4e-6	At2g16860	GCIP-interacting family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
23.1	99.8	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.4	99.7	GSM182035	Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
13.6	99.5	GSM292169	24_1018.1A.R010P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
11.9	99.4	GSM182032	Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
11.0	99.4	GSM244814	19_SLO.M5W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
10.6	99.3	GSM292229	25_C029.1B.R9B2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.2	99.2	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.2	98.9	GSM292198	5_C008.1A.V7A2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.9	98.8	GSM293381	66_C087.1Q.V7Q3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
6.9	98.8	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	1e-1	38	PsAffx.C4000134_at	PsAffx.C4000134	-	-	2e-2	At3g60270	uclacyanin, putative	C.G.	S.X.	Please select
0.01	4e-1	36	PsAffx.C112000020_at	PsAffx.C112000020	-	-	1e-1	At2g43140	DNA binding / transcription factor	C.G.	S.X.	Please select
0.03	4e-1	36	HgAffx.4834.1.S1_at	CD748590	-	-	4e+0	At2g15280	reticulon family protein (RTNLB10)	C.G.	S.X.	Please select
0.03	4e-1	36	HgAffx.2109.1.A1_at	CK351485	-	-	3e+0	At3g16750	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	36	HgAffx.2109.1.S1_at	CK351485	-	-	3e+0	At3g16750	unknown protein	C.G.	S.X.	Please select
0.03	4e-1	36	GmaAffx.65398.1.S1_at	BU760893	-	-	4e-3	At4g18760	AtRLP51 (Receptor Like Protein 51)	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C4000157_at	PsAffx.C4000157	-	-	3e-1	At3g28130	nodulin MtN21 family protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C210000017_at	PsAffx.C210000017	-	-	2e-1	At1g51430	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	PsAffx.C172000005_at	PsAffx.C172000005	-	-	1e-1	At5g11340	GCN5-related N-acetyltransferase (GNAT) family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e+0	32	Arabidopsis thaliana	At5g16200	831478	50S ribosomal protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	32	Hordeum vulgare	Contig14482_at	Contig14482	-	-	1e-4	At3g48940	remorin family protein	C.G.	S.X.	Please select
0.03	6e-1	36	Oryza sativa	Os12g0548700	AK058739.1	-	CI2C	1e+0	At4g14805	protease inhibitor/seed storage/lipid transfer protein (LTP)-related	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	7e+0	32	Populus trichocarpa	PtpAffx.205656.1.S1_at	pmrna11169	hypothetical protein	-	1e-2	At4g15790	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	8e-2	38	Triticum aestivum	Ta.14559.3.S1_x_at	CA725329	-	-	9e-1	At3g58320	-	C.G.	S.X.	Please select
0.03	6e+0	30	Vitis vinifera	1616806_at	CF605749	hypothetical protein LOC100259004	-	6e-2	At2g01340	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.6369.3.A1_at	AI881634	Putative zinc finger protein30	-	5e-5	At3g15680	zinc finger (Ran-binding) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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