Gene omics information

Query gene ID	HgAffx.21474.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.1	HgAffx.21474.1.S1_at	BI748279	-	-	8e-1	At5g27440	unknown protein	S.X.	H.G.	Please select
0.82	91.9	PsAffx.C803000001_s_at	PsAffx.C803000001	-	-	4e+0	At5g09510	40S ribosomal protein S15 (RPS15D)	S.X.	H.G.	Please select
0.79	90.8	HgAffx.18091.1.S1_at	CB379626	-	-	1e+0	At4g12760	unknown protein	S.X.	H.G.	Please select
0.74	89.2	PsAffx.C11000111_at	PsAffx.C11000111	-	-	6e-3	At4g39160	DNA binding / transcription factor	S.X.	H.G.	Please select
0.73	88.9	HgAffx.14960.1.S1_at	AF083554.1	-	-	3e-3	At3g26790	FUS3 (FUSCA 3)	S.X.	H.G.	Please select
0.72	88.1	HgAffx.2624.1.S1_at	CK350066	-	-	2e-1	At1g65040	protein binding / zinc ion binding	S.X.	H.G.	Please select
0.72	88.1	HgAffx.6346.1.S1_at	CB825865	-	-	4e+0	At3g02540	RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3)	S.X.	H.G.	Please select
0.71	87.8	PsAffx.C65000026_at	PsAffx.C65000026	-	-	4e-1	At3g25400	-	S.X.	H.G.	Please select
0.69	86.8	PsAffx.C77000074_at	PsAffx.C77000074	-	-	1e+0	At5g26620	unknown protein	S.X.	H.G.	Please select
0.68	86.4	PsAffx.C206000007_at	PsAffx.C206000007	-	-	1e+0	At5g52980	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
960.2	100.0	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
344.3	100.0	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
192.1	100.0	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
66.0	100.0	GSM293077	77_1077.1N.R046L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
57.8	99.9	GSM292222	16_C029.1B.R9B2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
41.5	99.9	GSM292897	71_1469.1L.R285L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
32.6	99.9	GSM293494	13_2013.2A.R203L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
31.7	99.9	GSM244786	12_CON.M5W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
29.7	99.8	GSM293849	88_3063.2D.V7D2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
28.4	99.8	GSM244783	11_CON.M5W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	7e-2	38	PsAffx.C216000007_at	PsAffx.C216000007	-	-	1e+0	At1g78080	RAP2.4 (related to AP2 4)	C.G.	S.X.	Please select
0.03	7e-2	38	GmaAffx.83317.2.S1_at	BM271235	-	-	2e+0	At5g52200	unknown protein	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C91000009_s_at	PsAffx.C91000009	-	-	2e-1	At3g50550	unknown protein	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C91000009_at	PsAffx.C91000009	-	-	2e-1	At3g50550	unknown protein	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C36000075_at	PsAffx.C36000075	-	-	5e-1	At2g32295	-	C.G.	S.X.	Please select
0.01	3e-1	36	PsAffx.C26000068_at	PsAffx.C26000068	-	-	2e+0	At2g37580	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.04	3e-1	36	PsAffx.C22000021_at	PsAffx.C22000021	-	-	4e+0	At4g05070	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	36	HgAffx.14104.1.S1_at	CB373829	-	-	9e-1	At5g45680	FK506-binding protein 1 (FKBP13)	C.G.	S.X.	Please select
0.05	3e-1	36	HgAffx.12480.1.S1_at	CB375502	-	-	3e+0	At4g02530	chloroplast thylakoid lumen protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	8e-1	34	Arabidopsis thaliana	At5g27440	832803	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	4e-1	34	Hordeum vulgare	EBro02_SQ001_J03_at	EBro02_SQ001_J03	-	-	9e-1	At1g04830	RabGAP/TBC domain-containing protein	C.G.	S.X.	Please select
0.05	1e-1	38	Oryza sativa	OsAffx.9638.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	1e+0	34	Populus trichocarpa	PtpAffx.220598.1.S1_at	pmrna37003	hypothetical protein	-	8e+0	At5g50760	auxin-responsive family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	2e-1	36	Triticum aestivum	TaAffx.106107.1.S1_at	CA724092	-	-	1e+1	At4g19420	pectinacetylesterase family protein	C.G.	S.X.	Please select
0.04	9e-1	32	Vitis vinifera	1610154_at	CB344341	hypothetical protein LOC100256753	-	4e-3	At5g52890	AT hook motif-containing protein	C.G.	S.X.	Please select
0.03	2e-2	38	Zea mays	Zm.9558.1.A1_at	BM336795	mitochondrial glycoprotein	-	6e+0	At4g25130	peptide methionine sulfoxide reductase, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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