Gene omics information

Query gene ID	HgAffx.19645.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	HgAffx.19645.1.S1_at	CA939535	-	-	4e+0	At5g14000	anac084 (Arabidopsis NAC domain containing protein 84)	S.X.	H.G.	Please select
0.50	71.7	Gma.437.1.S1_s_at	CD401627	Profilin, PRO2	-	1e-10	At2g19760	PRF1 (PROFILIN 1)	S.X.	H.G.	Please select
0.50	71.7	GmaAffx.89861.1.S1_s_at	CK606562	Ubiquitin	-	3e-127	At4g05320	UBQ10 (POLYUBIQUITIN 10)	S.X.	H.G.	Please select
0.50	71.7	Gma.2534.1.S1_s_at	BI967545	Ubiquitin	-	2e-140	At4g05320	UBQ10 (POLYUBIQUITIN 10)	S.X.	H.G.	Please select
0.35	48.6	GmaAffx.15790.1.A1_at	CD405768	-	-	2e+0	At1g70790	C2 domain-containing protein	S.X.	H.G.	Please select
0.32	43.7	GmaAffx.14602.1.S1_at	BM731566	-	-	2e-1	At3g45851	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
32.2	99.9	GSM292161	14-C017.1A.R9A3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
28.4	99.8	GSM294354	16_3172.2J.V7J2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
25.5	99.8	GSM292198	5_C008.1A.V7A2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
18.1	99.7	GSM182035	Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1	GSE7511	Expression data from soybean seed compartments with embryos at the heart stage
17.0	99.7	GSM244919	5_CON.M1W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
16.7	99.7	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
16.0	99.6	GSM191085	Soybean_Cotyledon_HI1	GSE7881	Expression data from soybean seed compartments with embryos at the cotyledon stage
15.6	99.6	GSM244799	15_CON.M1W2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
15.4	99.6	GSM147946	Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
13.8	99.5	GSM244905	39_VP9.I2W1.CEL, Experimental replicate 1	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	Gma.3186.1.A1_at	BU546093	-	-	5e-3	At2g22830	SQE2 (squalene epoxidase 2)	C.G.	S.X.	Please select
0.01	3e-1	36	Gma.2574.1.S1_a_at	BI469532	-	-	3e-38	At1g10760	SEX1 (STARCH EXCESS 1)	C.G.	S.X.	Please select
0.01	3e-1	36	Gma.2574.1.S1_at	BI469532	-	-	3e-38	At1g10760	SEX1 (STARCH EXCESS 1)	C.G.	S.X.	Please select
0.00	1e+0	34	PsAffx.C174000006_at	PsAffx.C174000006	-	-	3e-1	At5g65970	MLO10 (MILDEW RESISTANCE LOCUS O 10)	C.G.	S.X.	Please select
0.04	1e+0	34	HgAffx.8452.1.S1_at	CB380049	-	-	4e+0	At5g07571	-	C.G.	S.X.	Please select
0.04	1e+0	34	HgAffx.15553.1.S1_at	CB281458	-	-	4e+0	At3g29639	-	C.G.	S.X.	Please select
0.05	1e+0	34	GmaAffx.90419.1.S1_at	CF806144	-	-	6e-11	At3g22240	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	34	GmaAffx.76142.1.S1_at	BE022388	-	-	2e+0	At2g28510	Dof-type zinc finger domain-containing protein	C.G.	S.X.	Please select
0.03	1e+0	34	Gma.9961.1.S1_at	BE820833	-	-	1e-3	At4g34800	auxin-responsive family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At5g14000	831248	anac084 (Arabidopsis NAC domain containing protein 84)	F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	32	Hordeum vulgare	HZ65L19r_at	HZ65L19r	-	-	8e-1	At3g25860	LTA2	C.G.	S.X.	Please select
0.03	7e+0	32	Oryza sativa	Os03g0582601	9631.m03706	-	-	3e-1	At3g61970	NGA2 (NGATHA2)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	PtpAffx.202153.1.S1_s_at	pmrna4305	hypothetical protein	-	2e-1	At2g39445	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	2e+1	30	Triticum aestivum	TaAffx.9181.1.S1_at	CA609363	-	-	4e+0	At5g58560	phosphatidate cytidylyltransferase family protein	C.G.	S.X.	Please select
0.03	4e+0	30	Vitis vinifera	1621715_at	CD721690	-	-	5e+0	At5g09463	CPuORF41 (Conserved peptide upstream open reading frame 41)	C.G.	S.X.	Please select
0.03	6e+0	30	Zea mays	Zm.9818.1.A1_at	BM339999	-	-	5e+0	At5g14000	anac084 (Arabidopsis NAC domain containing protein 84)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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