Gene omics information

Query gene ID	HgAffx.19033.4.S1_s_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.80	91.5	HgAffx.19033.4.S1_s_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	S.X.	H.G.	Please select
0.91	98.6	GmaAffx.60715.1.S1_x_at	BU089784	-	-	5e+0	At5g53400	nuclear movement family protein	S.X.	H.G.	Please select
0.80	91.5	GmaAffx.60715.1.S1_at	BU089784	-	-	5e+0	At5g53400	nuclear movement family protein	S.X.	H.G.	Please select
0.80	91.5	HgAffx.3584.1.A1_s_at	CK349106	-	-	2e+0	At2g37110	unknown protein	S.X.	H.G.	Please select
0.67	86.1	HgAffx.3584.1.A1_x_at	CK349106	-	-	2e+0	At2g37110	unknown protein	S.X.	H.G.	Please select
0.40	57.1	PsAffx.C10000051_at	PsAffx.C10000051	-	-	1e+0	At5g09805	IDL3 (INFLORESCENCE DEFICIENT IN ABSCISSION (IDA)-LIKE 3)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
50.0	99.9	GSM294432	87_3176.2J.SLJ3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
32.4	99.9	GSM294349	11_2465.2J.R186L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
31.6	99.9	GSM294415	71_3165.2J.V7J1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
31.4	99.9	GSM294426	81_3163.2J.SLJ1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
31.0	99.9	GSM294446	15_3195.2K.V7K3U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
30.8	99.9	GSM294429	84_2437.2J.R091U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
29.1	99.8	GSM294351	13_2475.2J.R081U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
28.9	99.8	GSM201106	Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
27.9	99.8	GSM294365	26_3179.2J.V7J3U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
27.1	99.8	GSM294428	83_2450.2J.R161P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.94	0	737	HgAffx.19033.4.A1_x_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.94	0	737	HgAffx.19033.4.A1_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.77	4e-170	597	HgAffx.19033.1.S1_x_at	AF500028.1	-	-	8e-2	At5g46013	unknown protein	C.G.	S.X.	Please select
0.77	4e-170	597	HgAffx.19033.1.S1_s_at	AF500028.1	-	-	8e-2	At5g46013	unknown protein	C.G.	S.X.	Please select
0.77	4e-170	597	HgAffx.19033.1.S1_at	AF500028.1	-	-	8e-2	At5g46013	unknown protein	C.G.	S.X.	Please select
0.82	5e-120	430	HgAffx.19033.2.S1_at	AF500027.1	-	-	5e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.82	5e-120	430	HgAffx.19033.2.S1_x_at	AF500027.1	-	-	5e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.82	5e-120	430	HgAffx.19033.2.S1_s_at	AF500027.1	-	-	5e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.16	2e-15	83	HgAffx.6459.1.S1_at	CB825752	-	-	3e-1	At1g54410	dehydrin family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	6e-2	38	Arabidopsis thaliana	At1g54410	841883	dehydrin family protein	F:molecular_function unknown;P:response to water, response to stress;C:chloroplast;OMPFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	7e-3	40	Hordeum vulgare	Contig4808_s_at	Contig4808	-	-	2e-1	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.03	3e-2	40	Oryza sativa	Os03g0723800	AK110710.1	-	Hypothetical protein	2e-3	At5g05090	myb family transcription factor	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	3e-1	36	Populus trichocarpa	PtpAffx.219195.1.S1_at	pmrna35047	hypothetical protein	-	1e+0	At1g43890	ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	6e-2	38	Triticum aestivum	Ta.28784.1.S1_x_at	U73215.1	cold acclimation protein WCOR825	-	2e-4	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.06	7e-2	36	Vitis vinifera	1617166_s_at	CA808041	ripening-related protein-like	-	4e-1	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.06	4e-1	34	Zea mays	Zm.13889.1.A1_x_at	AF099405.1	R2R3MYB-domain protein	-	2e-1	At3g13540	ATMYB5 (MYB DOMAIN PROTEIN 5)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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