Gene omics information

Query gene ID	HgAffx.19033.4.A1_x_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	86.1	HgAffx.19033.4.A1_x_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	S.X.	H.G.	Please select
0.73	88.9	GmaAffx.15790.1.A1_at	CD405768	-	-	2e+0	At1g70790	C2 domain-containing protein	S.X.	H.G.	Please select
0.67	86.1	PsAffx.psHB004xH08f_at	PsAffx.psHB004xH08f	-	-	5e+0	At3g61840	unknown protein	S.X.	H.G.	Please select
0.50	71.7	HgAffx.19033.4.A1_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	S.X.	H.G.	Please select
0.43	60.6	GmaAffx.14602.1.S1_at	BM731566	-	-	2e-1	At3g45851	unknown protein	S.X.	H.G.	Please select
0.31	42.2	Gma.17298.2.S1_at	CA785058	-	-	9e-21	At2g32040	integral membrane transporter family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
12.6	99.5	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
9.8	99.3	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
9.0	99.2	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
8.4	99.1	GSM292230	28_1045.1B.R025L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
8.3	99.1	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
8.3	99.1	GSM201101	Laser capture microdissected (LCM) axis parenchyma at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
8.0	99.0	GSM201100	Laser capture microdissected (LCM) axis parenchyma at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
7.6	98.9	GSM201126	Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 1	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage
7.3	98.9	GSM293772	18_2164.2D.R027P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
7.2	98.9	GSM201107	Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 2	GSE8112	Expression data from soybean seed compartments with embryos at the early maturation stage

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.94	0	737	HgAffx.19033.4.S1_s_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.94	0	737	HgAffx.19033.4.A1_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.63	4e-170	597	HgAffx.19033.1.S1_x_at	AF500028.1	-	-	8e-2	At5g46013	unknown protein	C.G.	S.X.	Please select
0.63	4e-170	597	HgAffx.19033.1.S1_s_at	AF500028.1	-	-	8e-2	At5g46013	unknown protein	C.G.	S.X.	Please select
0.63	4e-170	597	HgAffx.19033.1.S1_at	AF500028.1	-	-	8e-2	At5g46013	unknown protein	C.G.	S.X.	Please select
0.52	5e-120	430	HgAffx.19033.2.S1_at	AF500027.1	-	-	5e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.52	5e-120	430	HgAffx.19033.2.S1_x_at	AF500027.1	-	-	5e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.52	5e-120	430	HgAffx.19033.2.S1_s_at	AF500027.1	-	-	5e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.10	2e-15	83	HgAffx.6459.1.S1_at	CB825752	-	-	3e-1	At1g54410	dehydrin family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	6e-2	38	Arabidopsis thaliana	At1g54410	841883	dehydrin family protein	F:molecular_function unknown;P:response to water, response to stress;C:chloroplast;OMPFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	7e-3	40	Hordeum vulgare	Contig4808_s_at	Contig4808	-	-	2e-1	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.03	3e-2	40	Oryza sativa	Os03g0723800	AK110710.1	-	Hypothetical protein	2e-3	At5g05090	myb family transcription factor	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	3e-1	36	Populus trichocarpa	PtpAffx.219195.1.S1_at	pmrna35047	hypothetical protein	-	1e+0	At1g43890	ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	6e-2	38	Triticum aestivum	Ta.28784.1.A1_at	U73215.1	-	-	2e-4	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.04	1e-3	42	Vitis vinifera	1618646_at	CF514673	hypothetical protein LOC100247238	-	4e-4	At3g52230	unknown protein	C.G.	S.X.	Please select
0.06	4e-1	34	Zea mays	Zm.13889.1.A1_x_at	AF099405.1	R2R3MYB-domain protein	-	2e-1	At3g13540	ATMYB5 (MYB DOMAIN PROTEIN 5)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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