Gene omics information

Query gene ID	HgAffx.19033.2.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	HgAffx.19033.2.S1_at	AF500027.1	-	-	5e-2	At1g54410	dehydrin family protein	S.X.	H.G.	Please select
0.27	35.7	PsAffx.C86000041_at	PsAffx.C86000041	-	-	2e-1	At1g31330	PSAF (photosystem I subunit F)	S.X.	H.G.	Please select
0.13	16.3	HgAffx.10011.1.S1_at	CB378490	-	-	1e+0	At5g65880	unknown protein	S.X.	H.G.	Please select
0.10	13.0	PsAffx.psZG005xN22f_s_at	PsAffx.psZG005xN22f	-	-	9e+0	At5g14602	unknown protein	S.X.	H.G.	Please select
0.04	7.0	PsAffx.C170000010_at	PsAffx.C170000010	-	-	7e+0	At3g62840	-	S.X.	H.G.	Please select
0.00	1.4	GmaAffx.99.2.A1_s_at	BE330213	Translationally controlled tumor-like protein	-	3e-1	At3g26670	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
55.6	99.9	GSM293082	81_C019.1N.R9N1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
50.9	99.9	GSM292163	18-1009.1A.R006L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
48.4	99.9	GSM292169	24_1018.1A.R010P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
31.6	99.9	GSM147940	Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
27.2	99.8	GSM293109	24_1143.1O.R091U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
24.9	99.8	GSM293188	70_1109.1O.R069U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
21.5	99.8	GSM293534	4_3006.2A.R9A1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
21.4	99.8	GSM147942	Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 1	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
21.4	99.8	GSM292202	64_1007.1A.R004U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
20.0	99.7	GSM293112	27_C047.1O.R9O2U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
1.00	0	827	HgAffx.19033.2.S1_x_at	AF500027.1	-	-	5e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
1.00	0	827	HgAffx.19033.2.S1_s_at	AF500027.1	-	-	5e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.79	4e-148	523	HgAffx.19033.1.S1_x_at	AF500028.1	-	-	8e-2	At5g46013	unknown protein	C.G.	S.X.	Please select
0.79	4e-148	523	HgAffx.19033.1.S1_s_at	AF500028.1	-	-	8e-2	At5g46013	unknown protein	C.G.	S.X.	Please select
0.79	4e-148	523	HgAffx.19033.1.S1_at	AF500028.1	-	-	8e-2	At5g46013	unknown protein	C.G.	S.X.	Please select
0.82	5e-120	430	HgAffx.19033.4.S1_s_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.52	5e-120	430	HgAffx.19033.4.A1_x_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.52	5e-120	430	HgAffx.19033.4.A1_at	CK350593	-	-	6e-2	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.24	2e-17	89	HgAffx.6459.1.S1_at	CB825752	-	-	3e-1	At1g54410	dehydrin family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	5e-2	38	Arabidopsis thaliana	At1g54410	841883	dehydrin family protein	F:molecular_function unknown;P:response to water, response to stress;C:chloroplast;OMPFB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	6e-3	40	Hordeum vulgare	Contig4808_s_at	Contig4808	-	-	2e-1	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.04	1e-1	38	Oryza sativa	Os12g0533250	9640.m03364	-	-	3e-1	At1g22885	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.07	3e-1	36	Populus trichocarpa	PtpAffx.219195.1.S1_at	pmrna35047	hypothetical protein	-	1e+0	At1g43890	ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.07	5e-2	38	Triticum aestivum	Ta.28784.1.S1_x_at	U73215.1	cold acclimation protein WCOR825	-	2e-4	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.06	6e-2	36	Vitis vinifera	1617166_s_at	CA808041	ripening-related protein-like	-	4e-1	At1g54410	dehydrin family protein	C.G.	S.X.	Please select
0.04	1e+0	32	Zea mays	ZmAffx.1009.1.A1_at	AI881408	-	-	2e+0	At5g47320	RPS19 (RIBOSOMAL PROTEIN S19)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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