Gene omics information

Query gene ID	HgAffx.15894.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	HgAffx.15894.1.S1_at	CB280462	-	-	4e-3	At5g44568	unknown protein	S.X.	H.G.	Please select
0.40	57.1	PsAffx.C96000021_at	PsAffx.C96000021	-	-	2e-2	At4g06634	zinc finger (C2H2 type) family protein	S.X.	H.G.	Please select
0.31	42.2	HgAffx.23882.1.S1_at	BF013967	-	-	2e-1	At1g52695	phospholipase/carboxylesterase family protein	S.X.	H.G.	Please select
0.29	39.0	HgAffx.16867.1.S1_at	CB279489	-	-	2e-1	At1g54060	ASIL1 (ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 1)	S.X.	H.G.	Please select
0.08	11.0	GmaAffx.91841.1.S1_x_at	CF807566	-	-	8e-28	At3g22110	PAC1	S.X.	H.G.	Please select
0.00	1.4	GmaAffx.14602.1.S1_at	BM731566	-	-	2e-1	At3g45851	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
74.1	100.0	GSM293641	68_2065.2B.R129U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
28.1	99.8	GSM293197	79_C053.1O.R9O3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
23.0	99.8	GSM294426	81_3163.2J.SLJ1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
22.9	99.8	GSM294518	80_2510.2K.R241P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.8	99.7	GSM147937	Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 2	GSE6414	Expression data from soybean seed compartments with embryos at the globular stage
17.1	99.7	GSM294417	73_3171.2J.V7J2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
17.0	99.7	GSM294421	77_2442.2J.R198P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
16.6	99.6	GSM244817	19_VP9.I1W3.CEL, Experimental replicate 3	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
16.4	99.6	GSM244892	36_SLO.I3U3.CEL, Experimental replicate 3	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
15.9	99.6	GSM171697	32_Z.B.I.3, Experimental replicate Z	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	9e-5	48	PsAffx.C28000104_at	PsAffx.C28000104	-	-	3e-2	At1g69810	WRKY36	C.G.	S.X.	Please select
0.01	4e-4	46	PsAffx.C13000071_at	PsAffx.C13000071	-	-	3e-1	At1g21850	sks8 (SKU5 Similar 8)	C.G.	S.X.	Please select
0.01	1e-3	44	PsAffx.C92000031_at	PsAffx.C92000031	-	-	5e-1	At4g02950	ubiquitin family protein	C.G.	S.X.	Please select
0.05	1e-3	44	HgAffx.13013.1.S1_at	CB374969	-	-	1e+1	At4g35070	-	C.G.	S.X.	Please select
0.05	1e-3	44	GmaAffx.56121.1.A1_at	BU544917	-	-	5e-2	At1g34440	unknown protein	C.G.	S.X.	Please select
0.05	1e-3	44	Gma.8567.2.S1_at	BU926871	-	-	5e-9	At3g27260	GTE8	C.G.	S.X.	Please select
0.04	1e-3	44	Gma.8567.1.S1_at	BE059626	-	-	4e-1	At5g38360	catalytic	C.G.	S.X.	Please select
0.05	5e-3	42	PsAffx.psZG010xG15f_s_at	PsAffx.psZG010xG15f	-	-	5e-2	At4g15790	unknown protein	C.G.	S.X.	Please select
0.04	5e-3	42	PsAffx.CL1552Contig1_at	PsAffx.CL1552Contig1	-	-	7e-2	At5g24316	proline-rich family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	4e-3	42	Arabidopsis thaliana	At5g44568	5008297	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	7e-3	40	Hordeum vulgare	Contig24413_at	Contig24413	-	-	1e+1	At5g23411	unknown protein	C.G.	S.X.	Please select
0.06	2e-3	44	Oryza sativa	Os01g0916700	NM_189945.1	-	Conserved hypothetical protein	5e-2	At5g60490	FLA12	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	9e-5	48	Populus trichocarpa	PtpAffx.202434.1.S1_at	pmrna4878	hypothetical protein	-	1e-2	At5g24500	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.05	3e-4	46	Triticum aestivum	TaAffx.113094.1.S1_at	CA618111	-	-	2e-1	At4g32030	unknown protein	C.G.	S.X.	Please select
0.05	2e-2	38	Vitis vinifera	1619942_at	CF568925	-	-	3e+0	At3g57370	transcription factor IIB (TFIIB) family protein	C.G.	S.X.	Please select
0.04	7e-3	40	Zea mays	Zm.17314.1.S1_at	CK369303	hypothetical protein LOC100277063	-	3e+0	At4g19620	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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