Gene omics information

Query gene ID	HgAffx.11003.1.S1_at
Gene name
Organism	Glycine max

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.6	HgAffx.11003.1.S1_at	CB824101	-	-	4e+0	At3g28630	-	S.X.	H.G.	Please select
0.83	92.5	PsAffx.C177000015_at	PsAffx.C177000015	-	-	2e-1	At4g25150	acid phosphatase, putative	S.X.	H.G.	Please select
0.77	90.3	HgAffx.24315.1.S1_at	CB374815	-	-	9e-1	At4g15930	microtubule motor	S.X.	H.G.	Please select
0.77	90.3	HgAffx.5776.1.S1_at	CB826435	-	-	1e+0	At5g59030	COPT1 (copper transporter 1)	S.X.	H.G.	Please select
0.67	86.1	PsAffx.C47000085_at	PsAffx.C47000085	-	-	2e+0	At1g04350	2-oxoglutarate-dependent dioxygenase, putative	S.X.	H.G.	Please select
0.56	78.2	PsAffx.C6000193_at	PsAffx.C6000193	-	-	1e+1	Atmg00450	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
1515.1	100.0	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
36.0	99.9	GSM292162	15-1002.1A.R001P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
27.6	99.8	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
18.1	99.7	GSM293938	84_3083.2E.R9E2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
16.6	99.6	GSM293241	29_1545.1P.R068L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
15.7	99.6	GSM294079	37_2309.2G.R097L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
14.8	99.6	GSM244931	8_SLO.I5L4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
14.8	99.6	GSM292666	17_C177.1J.SLJ3U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
13.1	99.5	GSM293654	7_2070.2B.R213P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
12.0	99.4	GSM293743	76_2131.2C.R080L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.61	3e-54	212	HgAffx.9789.1.A1_at	CB378712	-	-	2e+1	At5g39920	-	C.G.	S.X.	Please select
0.61	3e-54	212	HgAffx.9789.1.S1_at	CB378712	-	-	2e+1	At5g39920	-	C.G.	S.X.	Please select
0.03	2e+0	34	PsAffx.C83000042_at	PsAffx.C83000042	-	-	7e+0	At3g13630	unknown protein	C.G.	S.X.	Please select
0.02	6e+0	32	PsAffx.C87000023_at	PsAffx.C87000023	-	-	2e+0	At4g24240	WRKY7	C.G.	S.X.	Please select
0.01	6e+0	32	PsAffx.C87000022_at	PsAffx.C87000022	-	-	3e+0	At4g24240	WRKY7	C.G.	S.X.	Please select
0.01	6e+0	32	PsAffx.C54000112_at	PsAffx.C54000112	-	-	3e-1	At5g20110	dynein light chain, putative	C.G.	S.X.	Please select
0.01	6e+0	32	PsAffx.C32000096_at	PsAffx.C32000096	-	-	7e+0	At5g18180	Gar1 RNA-binding region family protein	C.G.	S.X.	Please select
0.02	6e+0	32	PsAffx.C1316000001_at	PsAffx.C1316000001	-	-	2e+0	At5g18180	Gar1 RNA-binding region family protein	C.G.	S.X.	Please select
0.02	6e+0	32	PsAffx.C132000035_at	PsAffx.C132000035	-	-	3e+0	At2g28610	PRS (PRESSED FLOWER)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e+0	32	Arabidopsis thaliana	At3g28630	822493	-	F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	5e-1	34	Hordeum vulgare	EBpi01_SQ004_C23_at	EBpi01_SQ004_C23	-	-	9e+0	At5g46300	unknown protein	C.G.	S.X.	Please select
0.04	8e+0	32	Oryza sativa	OsAffx.17462.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e+0	32	Populus trichocarpa	PtpAffx.161939.1.A1_at	CK093706	hypothetical protein	-	3e-1	At5g14070	ROXY2	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	4e+0	32	Triticum aestivum	TaAffx.113628.2.S1_x_at	CA598324	-	-	3e+0	At2g33847	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	32	Vitis vinifera	1612701_at	CF517066	hypothetical protein LOC100252456	-	4e-71	At5g64940	ATATH13	C.G.	S.X.	Please select
0.03	7e+0	30	Zea mays	ZmAffx.958.1.S1_at	AI833529	-	-	2e-1	At3g49570	LSU3 (RESPONSE TO LOW SULFUR 3)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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