Gene omics information

Query gene ID HZ40E11r_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1HZ40E11r_atHZ40E11r--9e-1At1g12520ATCCS (COPPER CHAPERONE FOR SOD1)S.X.H.G.
0.3342.6Contig9551_atContig9551--1e-5At5g08170EMB1873 (EMBRYO DEFECTIVE 1873)S.X.H.G.
0.3342.6Contig9080_s_atContig9080--5e-14At1g50140ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingS.X.H.G.
0.2122.6Contig5749_atContig5749--6e-16At2g25310carbohydrate bindingS.X.H.G.
0.2021.1Contig22133_atContig22133--6e+0At5g4876060S ribosomal protein L13A (RPL13aD)S.X.H.G.
0.1919.6Contig23222_atContig23222--4e-3At3g52980RNA recognition motif (RRM)-containing proteinS.X.H.G.
0.1818.2Contig8592_atContig8592--7e-1At3g17090protein phosphatase 2C family protein / PP2C family proteinS.X.H.G.
0.1716.9HV_CEb0011I04r2_atHV_CEb0011I04r2--4e+0At1g54775-S.X.H.G.
0.1615.3Contig4715_atContig4715--1e+0At4g10810unknown proteinS.X.H.G.
0.1412.9Contig10617_atContig10617--6e-2At5g66490unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.399.6GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
11.099.2GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
10.599.2GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barley
10.499.2GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
9.198.9GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
7.498.5GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barley
5.097.2GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grains
4.296.3GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.296.3GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.196.2GSM261021ABA-Control-rep1GSE10328ABA experiment
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.376e-34143HS07D13u_x_atHS07D13u--1e+0At3g02140TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2)C.G.S.X.
0.376e-34143HS07D13u_atHS07D13u--1e+0At3g02140TMAC2 (TWO OR MORE ABRES-CONTAINING GENE 2)C.G.S.X.
0.044e-134Contig26505_atContig26505--1e+0At5g54300unknown proteinC.G.S.X.
0.032e+032Contig12433_atContig12433--2e+0Atmg01280-C.G.S.X.
0.032e+032Contig7012_atContig7012--6e+0At1g57730zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.027e+030Contig14680_atContig14680--2e+0At1g19550dehydroascorbate reductase, putativeC.G.S.X.
0.047e+030Contig7897_atContig7897--7e-3At1g72140proton-dependent oligopeptide transport (POT) family proteinC.G.S.X.
0.017e+030Contig7681_s_atContig7681--4e-18At5g64030dehydration-responsive protein-relatedC.G.S.X.
0.027e+030Contig12124_atContig12124--7e+0At3g27680self-incompatibility protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.039e-134Arabidopsis thalianaAt1g12520837808ATCCS (COPPER CHAPERONE FOR SOD1)Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.---C.G.S.X.
0.045e+032Glycine maxGmaAffx.49235.1.S1_atBE610145--7e-1At1g24620polcalcin, putative / calcium-binding pollen allergen, putativeC.G.S.X.
0.042e+034Oryza sativaOs.51442.1.S1_at---0C.G.S.X.
0.041e+034Populus trichocarpaPtpAffx.214976.1.S1_x_atpmrna28911hypothetical protein-6e-4At5g66815unknown proteinC.G.S.X.
0.861e-126452Triticum aestivumTaAffx.25353.1.S1_atCA701760--3e+0At5g53610glycosyl hydrolase family protein 17C.G.S.X.
0.044e+030Vitis vinifera1622197_atCF403402hypothetical protein LOC100265428-2e-1At5g14600tRNA (adenine-N1-)-methyltransferaseC.G.S.X.
0.205e-1683Zea maysZm.18995.1.A1_atCO528199--3e-1At1g47960C/VIF1 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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