Gene omics information

Query gene ID	HY06F24u_x_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.73	88.7	HY06F24u_x_at	HY06F24u	-	-	1e+1	At5g05710	pleckstrin homology (PH) domain-containing protein	S.X.	H.G.	Please select
0.91	98.1	V00087.1_at	V00087.1	-	-	3e-1	At5g43525	-	S.X.	H.G.	Please select
0.67	84.7	HVSMEg0002G01r2_x_at	HVSMEg0002G01r2	-	-	6e+0	At5g39360	EDL2 (EID1-like 2)	S.X.	H.G.	Please select
0.55	72.0	HY02C19u_at	HY02C19u	-	-	5e+0	At4g15610	integral membrane family protein	S.X.	H.G.	Please select
0.50	66.9	EBro02_SQ008_P15_at	EBro02_SQ008_P15	-	-	1e+1	At5g43211	unknown protein	S.X.	H.G.	Please select
0.42	55.2	EBem04_SQ003_H15_at	EBem04_SQ003_H15	-	-	3e+0	At5g33806	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.9	97.9	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.8	97.8	GSM261027	ABA-Late-rep1	GSE10328	ABA experiment
5.3	97.4	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
5.3	97.4	GSM261028	ABA-Late-rep2	GSE10328	ABA experiment
5.1	97.3	GSM261021	ABA-Control-rep1	GSE10328	ABA experiment
5.0	97.2	GSM161220	cold treatment rep2	GSE6993	Barley low temperature stress
4.7	96.9	GSM68904	27 h salt stressed replicate 1	GSE3097	Barley1 salinity stress study
4.3	96.4	GSM261024	ABA-Early-rep1	GSE10328	ABA experiment
4.3	96.4	GSM160823	19% SWC rep1	GSE6990	Barley drought stress
4.1	96.2	GSM261040	Dicktoo-deacclimation-rep2	GSE10329	Low temperature stress in cv. Dicktoo

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	3e-29	125	Contig2255_at	Contig2255	-	-	9e-12	At3g14230	RAP2.2	C.G.	S.X.	Please select
0.33	1e-16	83	HVSMEb0005H04r2_at	HVSMEb0005H04r2	-	-	2e+0	At3g44755	unknown protein	C.G.	S.X.	Please select
0.06	2e-6	50	Contig2257_s_at	Contig2257	-	-	9e-16	At3g14230	RAP2.2	C.G.	S.X.	Please select
0.05	9e-2	34	HM08O10r_s_at	HM08O10r	-	-	1e+0	At2g07785	NADH-ubiquinone oxidoreductase, putative	C.G.	S.X.	Please select
0.05	9e-2	34	Contig26631_at	Contig26631	-	-	1e+0	At2g07785	NADH-ubiquinone oxidoreductase, putative	C.G.	S.X.	Please select
0.06	2e+0	30	HB25H11r_at	HB25H11r	-	-	3e+0	At5g02120	OHP (ONE HELIX PROTEIN)	C.G.	S.X.	Please select
0.06	2e+0	30	HB25H11r_s_at	HB25H11r	-	-	3e+0	At5g02120	OHP (ONE HELIX PROTEIN)	C.G.	S.X.	Please select
0.02	6e+0	28	Contig9578_s_at	Contig9578	-	-	9e-13	At5g64030	dehydration-responsive protein-related	C.G.	S.X.	Please select
0.03	6e+0	28	Contig22164_at	Contig22164	-	-	4e-1	At4g26250	AtGolS6 (Arabidopsis thaliana galactinol synthase 6)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	1e+1	28	Arabidopsis thaliana	At5g05710	830455	pleckstrin homology (PH) domain-containing protein	F:molecular_function unknown;P:unknown;C:cellular_component unknown;MOPFV	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	2e+1	28	Glycine max	PsAffx.psZS012xJ09f_at	PsAffx.psZS012xJ09f	-	-	2e+0	At1g64490	unknown protein	C.G.	S.X.	Please select
0.02	2e+1	28	Oryza sativa	OsAffx.28393.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	2e+1	28	Populus trichocarpa	PtpAffx.223907.1.S1_at	pmrna42129	hypothetical protein	-	7e-1	Atmg00880	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.06	1e+1	28	Triticum aestivum	TaAffx.57969.1.S1_at	CA623473	-	-	8e-10	At5g49190	SUS2 (SUCROSE SYNTHASE 2)	C.G.	S.X.	Please select
0.04	1e+1	26	Vitis vinifera	1622320_at	CF514116	-	-	2e+1	At5g05113	unknown protein	C.G.	S.X.	Please select
0.06	1e+0	30	Zea mays	ZmAffx.160.1.A1_at	AI668152	-	-	8e-1	At4g24380	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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