Gene omics information

Query gene ID	HY03E10u_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HY03E10u_s_at	HY03E10u	-	-	1e+1	At5g63060	transporter	S.X.	H.G.	Please select
0.80	92.5	Contig1139_s_at	Contig1139	-	-	1e-19	At3g07110	60S ribosomal protein L13A (RPL13aA)	S.X.	H.G.	Please select
0.67	84.7	Contig20455_at	Contig20455	-	-	2e+0	At5g48220	indole-3-glycerol phosphate synthase, putative	S.X.	H.G.	Please select
0.60	77.3	Contig13274_at	Contig13274	-	-	9e-3	At1g71690	unknown protein	S.X.	H.G.	Please select
0.44	58.9	Contig18744_at	Contig18744	-	-	2e+0	At5g41630	F-box family protein	S.X.	H.G.	Please select
0.40	53.1	Contig9290_at	Contig9290	-	-	5e-15	At1g62020	coatomer protein complex, subunit alpha, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
4.4	96.6	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
3.7	95.5	GSM282032	Malting_day1_Morex_rep1	GSE11200	Expression data from malting barley seeds
3.6	95.3	GSM160823	19% SWC rep1	GSE6990	Barley drought stress
3.5	95.1	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
3.4	94.8	GSM161221	cold treatment rep3	GSE6993	Barley low temperature stress
3.3	94.6	GSM282021	Malting_day4_Legacy_rep 2	GSE11200	Expression data from malting barley seeds
3.3	94.6	GSM282035	Malting_day4_Morex_rep1	GSE11200	Expression data from malting barley seeds
3.2	94.3	GSM160826	19% SWC rep3	GSE6990	Barley drought stress
3.2	94.3	GSM238418	Endosperm 25DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.2	94.3	GSM261024	ABA-Early-rep1	GSE10328	ABA experiment

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.72	9e-119	424	Contig13943_s_at	Contig13943	-	-	4e+0	At4g00880	auxin-responsive family protein	C.G.	S.X.	Please select
0.62	1e-114	410	Contig13944_at	Contig13944	-	-	3e-1	At2g47210	myb family transcription factor	C.G.	S.X.	Please select
0.05	5e+0	30	rbags1i23_s_at	rbags1i23	-	-	2e-16	At1g67430	60S ribosomal protein L17 (RPL17B)	C.G.	S.X.	Please select
0.03	5e+0	30	Contig12294_at	Contig12294	-	-	3e-14	At5g27820	ribosomal protein L18 family protein	C.G.	S.X.	Please select
0.04	5e+0	30	Contig18826_at	Contig18826	-	-	2e-1	At5g67620	unknown protein	C.G.	S.X.	Please select
0.03	5e+0	30	HA04i02r_at	HA04i02r	-	-	4e+0	At3g28674	unknown protein	C.G.	S.X.	Please select
0.02	5e+0	30	Contig12936_at	Contig12936	-	-	8e-3	At1g71691	GDSL-motif lipase/hydrolase family protein	C.G.	S.X.	Please select
0.02	5e+0	30	Contig21572_at	Contig21572	-	-	5e-1	At5g48655	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.01	5e+0	30	Contig9989_at	Contig9989	-	-	2e-1	At4g23710	VAG2	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e+1	30	Arabidopsis thaliana	At5g63060	836426	transporter	F:transporter activity;P:transport;C:chloroplast;MPFO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e+0	32	Glycine max	GmaAffx.82204.3.S1_at	AW755511	-	-	8e-1	At4g08485	-	C.G.	S.X.	Please select
0.04	5e+0	32	Oryza sativa	OsAffx.31495.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	9e-1	34	Populus trichocarpa	PtpAffx.161836.2.A1_at	CK097344	-	-	6e+0	At5g34828	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+1	30	Triticum aestivum	TaAffx.31910.1.S1_at	CA605371	-	-	4e+0	At3g28900	60S ribosomal protein L34 (RPL34C)	C.G.	S.X.	Please select
0.04	3e+0	30	Vitis vinifera	1613344_at	CF202628.1	-	-	4e+0	At5g17650	glycine/proline-rich protein	C.G.	S.X.	Please select
0.03	5e+0	30	Zea mays	Zm.10157.1.A1_at	BM382490	-	-	5e+0	At3g47680	DNA binding	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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