Gene omics information

Query gene ID	HX07O15r_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	74.9	HX07O15r_at	HX07O15r	-	-	4e+0	At5g05470	EIF2 ALPHA	S.X.	H.G.	Please select
0.71	87.1	Contig26019_at	Contig26019	-	-	3e+0	At2g29650	PHT4	S.X.	H.G.	Please select
0.50	66.9	Contig11177_at	Contig11177	-	-	5e-1	At5g53730	harpin-induced family protein / HIN1 family protein / harpin-responsive family protein	S.X.	H.G.	Please select
0.46	61.0	Contig14949_at	Contig14949	-	-	3e-2	At3g19100	calcium-dependent protein kinase, putative / CDPK, putative	S.X.	H.G.	Please select
0.44	58.9	Contig13965_at	Contig13965	-	-	7e+0	At5g55056	unknown protein	S.X.	H.G.	Please select
0.44	58.9	Contig7087_at	Contig7087	-	-	8e-1	At3g27160	GHS1 (GLUCOSE HYPERSENSITIVE 1)	S.X.	H.G.	Please select
0.40	53.1	Contig26369_at	Contig26369	-	-	4e+0	At4g02620	vacuolar ATPase subunit F family protein	S.X.	H.G.	Please select
0.36	47.1	Contig13884_at	Contig13884	-	-	3e-5	At2g37510	RNA-binding protein, putative	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
26.3	99.8	GSM261072	Albina f-17 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
25.4	99.8	GSM261071	Albina f-17 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
19.7	99.7	GSM261077	Albina e-16 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
17.8	99.7	GSM261069	Albina f-17 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
17.0	99.6	GSM261066	Xantha s-46 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
16.9	99.6	GSM261068	Albina f-17 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
15.4	99.6	GSM261065	Xantha s-46 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
14.1	99.5	GSM261078	Albina e-16 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
13.8	99.5	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
13.1	99.4	GSM261067	Xantha s-46 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e+0	32	Contig12807_at	Contig12807	-	-	3e+0	At3g14595	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig9936_at	Contig9936	-	-	5e-1	At5g21940	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig11466_at	Contig11466	-	-	6e-4	At4g12070	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig10586_at	Contig10586	-	-	3e+0	At5g55610	unknown protein	C.G.	S.X.	Please select
0.01	8e+0	30	Contig8523_s_at	Contig8523	-	-	9e-13	At3g52820	PAP22 (PURPLE ACID PHOSPHATASE 22)	C.G.	S.X.	Please select
0.02	8e+0	30	Contig7100_at	Contig7100	-	-	6e-10	At4g29330	DER1 (DERLIN-1)	C.G.	S.X.	Please select
0.03	8e+0	30	Contig16950_at	Contig16950	-	-	5e+0	At5g09540	DNAJ heat shock N-terminal domain-containing protein	C.G.	S.X.	Please select
0.02	8e+0	30	Contig13198_at	Contig13198	-	-	4e-1	At4g35655	-	C.G.	S.X.	Please select
0.02	8e+0	30	Contig3791_s_at	Contig3791	-	-	1e-8	At5g66530	aldose 1-epimerase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e+0	32	Arabidopsis thaliana	At5g05470	830430	EIF2 ALPHA	protein synthesis initiation factor eIF2 alpha	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	2e+0	34	Glycine max	Gma.885.1.A1_at	BE822715	-	-	1e+1	At4g22230	-	C.G.	S.X.	Please select
0.05	2e+0	34	Oryza sativa	OsAffx.28261.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	6e+0	32	Populus trichocarpa	PtpAffx.42106.1.A1_at	DN485496	-	-	2e-2	At2g24370	ATP binding / kinase/ protein kinase/ protein serine/threonine kinase	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	34	Triticum aestivum	TaAffx.72743.1.S1_at	CA655286	-	-	1e+0	At2g20100	ethylene-responsive family protein	C.G.	S.X.	Please select
0.03	3e-1	34	Vitis vinifera	1608496_at	CD798086	hypothetical protein LOC100252311	-	2e-1	At3g16170	acyl-activating enzyme 13 (AAE13)	C.G.	S.X.	Please select
0.03	5e-1	34	Zea mays	Zm.11387.1.A1_at	BM350291	-	-	4e-1	At1g71930	VND7 (VASCULAR RELATED NAC-DOMAIN PROTEIN 7)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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