Gene omics information

Query gene ID	HW08K02u_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HW08K02u_at	HW08K02u	-	-	2e-1	At5g02650	unknown protein	S.X.	H.G.	Please select
0.50	66.9	Contig23889_at	Contig23889	-	-	5e+0	At5g26110	ATP binding / catalytic/ protein kinase	S.X.	H.G.	Please select
0.46	61.0	Contig9975_at	Contig9975	-	-	1e+0	At1g27435	unknown protein	S.X.	H.G.	Please select
0.44	58.9	Contig9101_s_at	Contig9101	-	-	7e+0	At5g23930	mitochondrial transcription termination factor-related / mTERF-related	S.X.	H.G.	Please select
0.36	47.1	Contig10324_at	Contig10324	-	-	5e-33	At4g21800	QQT2 (quatre-quart2)	S.X.	H.G.	Please select
0.36	47.1	Contig8340_at	Contig8340	-	-	8e-3	At2g41190	amino acid transporter family protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
28.5	99.8	GSM440974	Stressed awn_Rep3	GSE17669	Gene expression in the barley spike during drought stress
21.7	99.8	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
15.3	99.6	GSM398257	Martin_3d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
15.3	99.6	GSM440972	Stressed awn_Rep1	GSE17669	Gene expression in the barley spike during drought stress
15.2	99.5	GSM440973	Stressed awn_Rep2	GSE17669	Gene expression in the barley spike during drought stress
14.2	99.5	GSM398255	Martin_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
13.3	99.4	GSM398258	Martin_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
12.4	99.4	GSM440962	Stressed lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
12.3	99.4	GSM440961	Stressed lemma_Rep2	GSE17669	Gene expression in the barley spike during drought stress
12.2	99.4	GSM398256	Martin_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	1e-1	36	Contig1701_s_at	Contig1701	-	-	9e-5	At1g20440	COR47 (COLD-REGULATED 47)	C.G.	S.X.	Please select
0.03	1e-1	36	Contig1721_at	Contig1721	-	-	9e-5	At1g20440	COR47 (COLD-REGULATED 47)	C.G.	S.X.	Please select
0.02	4e-1	34	Contig9352_at	Contig9352	-	-	5e-2	At5g05230	ubiquitin-protein ligase	C.G.	S.X.	Please select
0.01	4e-1	34	Contig6159_at	Contig6159	-	-	2e-2	At4g30980	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select
0.03	4e-1	34	Contig23973_at	Contig23973	-	-	4e-1	At2g04039	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig14788_at	Contig14788	-	-	4e-18	At3g51770	ETO1 (ETHYLENE OVERPRODUCER 1)	C.G.	S.X.	Please select
0.04	2e+0	32	HU05G03u_s_at	HU05G03u	-	-	3e+0	At2g16535	-	C.G.	S.X.	Please select
0.03	2e+0	32	Contig2208_at	Contig2208	-	-	1e-1	At4g33730	pathogenesis-related protein, putative	C.G.	S.X.	Please select
0.01	2e+0	32	Contig10720_at	Contig10720	-	-	1e-39	At1g22620	ATSAC1 (suppressor of actin 1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-1	36	Arabidopsis thaliana	At5g02650	831848	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.08	3e-1	36	Glycine max	HgAffx.22743.1.S1_at	BG310807	-	-	6e+0	At3g63220	kelch repeat-containing F-box family protein	C.G.	S.X.	Please select
0.17	1e-10	67	Oryza sativa	Os03g0610400	AY305868.1	-	Zn-finger, C2H2 type domain containing protein	2e-3	At5g43170	AZF3 (ARABIDOPSIS ZINC-FINGER PROTEIN 3)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	5e+0	32	Populus trichocarpa	PtpAffx.218265.1.S1_at	pmrna33817	hypothetical protein	-	1e+1	At4g25140	OLEO1 (OLEOSIN 1)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.19	8e-29	127	Triticum aestivum	TaAffx.105749.1.S1_at	CA730358	-	-	3e+0	At5g55460	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.05	1e+0	32	Vitis vinifera	1619328_s_at	CF514383	-	-	3e-1	At5g44560	VPS2.2	C.G.	S.X.	Please select
0.04	2e-2	38	Zea mays	Zm.6849.1.A1_at	AI065467	hypothetical protein LOC100275227	-	4e+0	At5g01380	transcription factor	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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