Gene omics information

Query gene ID	HV_CEb0017M09r2_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HV_CEb0017M09r2_s_at	HV_CEb0017M09r2	-	-	4e+0	At4g09640	-	S.X.	H.G.	Please select
0.55	72.0	Contig2864_s_at	Contig2864	-	-	1e-1	At2g32860	BGLU33 (BETA GLUCOSIDASE 33)	S.X.	H.G.	Please select
0.23	26.1	Contig502_x_at	Contig502	-	-	2e+0	At3g49820	unknown protein	S.X.	H.G.	Please select
0.15	14.1	Contig2866_s_at	Contig2866	-	-	3e-40	At4g35830	aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO)	S.X.	H.G.	Please select
0.11	9.4	Contig2864_at	Contig2864	-	-	1e-1	At2g32860	BGLU33 (BETA GLUCOSIDASE 33)	S.X.	H.G.	Please select
0.04	3.4	Contig23446_at	Contig23446	-	-	3e+0	At5g08391	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
27.7	99.8	GSM372984	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
21.1	99.7	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
20.7	99.7	GSM373001	genotype: 11542 - pathogen isolates: K1 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
18.9	99.7	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
17.6	99.6	GSM372988	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
16.7	99.6	GSM373004	genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
16.4	99.6	GSM372987	genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
16.2	99.6	GSM372985	genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
15.3	99.6	GSM372995	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
14.6	99.5	GSM372991	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	2e-6	52	Contig16179_s_at	Contig16179	-	-	5e+0	At4g31700	RPS6 (RIBOSOMAL PROTEIN S6)	C.G.	S.X.	Please select
0.04	5e-4	44	Contig16710_at	Contig16710	-	-	2e+0	At4g21350	PUB8 (PLANT U-BOX 8)	C.G.	S.X.	Please select
0.02	1e-1	36	Contig10984_at	Contig10984	-	-	3e-12	At5g58980	ceramidase family protein	C.G.	S.X.	Please select
0.04	1e-1	36	Contig8178_at	Contig8178	-	-	5e-3	At2g41905	unknown protein	C.G.	S.X.	Please select
0.03	5e-1	34	Contig14776_at	Contig14776	-	-	5e+0	At5g56150	UBC30 (ubiquitin-conjugating enzyme 30)	C.G.	S.X.	Please select
0.01	5e-1	34	Contig8626_at	Contig8626	-	-	3e+0	At3g05935	unknown protein	C.G.	S.X.	Please select
0.03	2e+0	32	HV_CEb0010F15r2_at	HV_CEb0010F15r2	-	-	5e-6	At2g45500	ATP binding / nucleoside-triphosphatase/ nucleotide binding	C.G.	S.X.	Please select
0.02	2e+0	32	Contig11131_s_at	Contig11131	-	-	6e-25	At2g45500	ATP binding / nucleoside-triphosphatase/ nucleotide binding	C.G.	S.X.	Please select
0.02	2e+0	32	Contig11131_at	Contig11131	-	-	6e-25	At2g45500	ATP binding / nucleoside-triphosphatase/ nucleotide binding	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	4e+0	32	Arabidopsis thaliana	At4g09640	826550	-	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOBA	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	3e-1	36	Glycine max	Gma.5128.1.A1_at	BI971138	-	-	8e+0	At5g28463	unknown protein	C.G.	S.X.	Please select
0.10	7e-28	125	Oryza sativa	Os07g0131000	9635.m00314	-	Serine/threonine protein kinase family protein	2e-2	At2g37710	RLK (receptor lectin kinase)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	1e+0	34	Populus trichocarpa	PtpAffx.223938.1.S1_at	pmrna42163	hypothetical protein	-	3e+0	At1g37150	HCS2 (holocarboxylase synthetase 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.10	1e+0	34	Triticum aestivum	TaAffx.29371.1.S1_at	CA644147	-	-	4e+0	At5g18310	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	32	Vitis vinifera	1611278_at	CF512073	-	-	4e-12	At1g67760	ATP binding / protein binding / unfolded protein binding	C.G.	S.X.	Please select
0.11	4e-7	54	Zea mays	Zm.18285.1.A1_at	CO528175	-	-	5e+0	At1g38630	unknown protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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