Gene omics information

Query gene ID	HV_CEb0011B08r2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.88	95.2	HV_CEb0011B08r2_at	HV_CEb0011B08r2	-	-	4e+0	At3g61880	CYP78A9 (CYTOCHROME P450 78A9)	S.X.	H.G.	Please select
0.55	72.0	rbags25g01_at	rbags25g01	-	-	1e+0	At5g22880	HTB2	S.X.	H.G.	Please select
0.50	66.9	Contig2878_at	Contig2878	-	-	4e-1	At3g49630	2-oxoacid-dependent oxidase, putative	S.X.	H.G.	Please select
0.42	55.2	Contig8778_s_at	Contig8778	-	-	2e-2	At3g10185	-	S.X.	H.G.	Please select
0.40	53.1	Contig8550_s_at	Contig8550	-	-	9e-1	At3g48660	unknown protein	S.X.	H.G.	Please select
0.40	53.1	Contig23603_at	Contig23603	-	-	8e-2	At5g40870	AtUK/UPRT1 (Uridine kinase/Uracil phosphoribosyltransferase 1)	S.X.	H.G.	Please select
0.38	49.5	Contig8551_at	Contig8551	-	-	8e-3	At3g55050	serine/threonine protein phosphatase 2C (PP2C6)	S.X.	H.G.	Please select
0.21	22.6	Contig11684_at	Contig11684	-	-	2e-3	At4g09270	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
11.8	99.3	GSM419977	Palea_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
11.8	99.3	GSM440965	Control palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
10.9	99.2	GSM372960	genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
10.3	99.1	GSM372959	genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.3	99.0	GSM372973	genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.4	98.8	GSM372953	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.4	98.8	GSM372938	genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
8.2	98.7	GSM372941	genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.8	98.6	GSM440967	Stressed palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress
7.6	98.6	GSM372942	genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.07	5e-7	54	HVSMEn0008D16r2_at	HVSMEn0008D16r2	-	-	6e-2	At2g44290	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)	C.G.	S.X.	Please select
0.06	1e-4	46	Contig24520_at	Contig24520	-	-	1e+0	At5g60640	ATPDIL1-4 (PDI-LIKE 1-4)	C.G.	S.X.	Please select
0.03	5e-1	34	HVSMEb0005C06r2_at	HVSMEb0005C06r2	-	-	3e-1	At2g17800	ARAC1	C.G.	S.X.	Please select
0.06	5e-1	34	HV_CEb0003J19r2_at	HV_CEb0003J19r2	-	-	4e+0	At3g46086	unknown protein	C.G.	S.X.	Please select
0.07	5e-1	34	HVSMEm0003G16r2_at	HVSMEm0003G16r2	-	-	4e+0	At1g65310	XTH17 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17)	C.G.	S.X.	Please select
0.02	5e-1	34	Contig12571_at	Contig12571	-	-	3e+0	At5g37520	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig24605_at	Contig24605	-	-	1e-1	At1g51510	Y14	C.G.	S.X.	Please select
0.03	2e+0	32	Contig21916_at	Contig21916	-	-	4e-1	At2g42760	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig5616_at	Contig5616	-	-	4e-17	At4g33250	EIF3K (EUKARYOTIC TRANSLATION INITIATION FACTOR 3K)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	4e+0	32	Arabidopsis thaliana	At3g61880	825361	CYP78A9 (CYTOCHROME P450 78A9)	Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e+0	32	Glycine max	PsAffx.C57000056_s_at	PsAffx.C57000056	-	-	5e-9	At1g10630	ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F)	C.G.	S.X.	Please select
0.14	2e-34	147	Oryza sativa	Os02g0569000	AK059010.1	-	Cytochrome P450 family protein	5e-2	At1g16210	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+1	30	Populus trichocarpa	PtpAffx.4633.2.S1_at	CA823688	-	-	9e-47	At1g07820	histone H4	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.26	2e-63	242	Triticum aestivum	Ta.12137.1.A1_at	BQ171664	-	-	9e-3	At4g13770	CYP83A1 (CYTOCHROME P450 83A1)	C.G.	S.X.	Please select
0.03	2e+1	28	Vitis vinifera	1619958_at	CF515517	-	-	4e+0	At3g17611	ATRBL14 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 14)	C.G.	S.X.	Please select
0.06	1e-4	46	Zea mays	Zm.19108.1.S1_at	CO520889	hypothetical protein LOC100278079	-	6e+0	At1g05710	ethylene-responsive protein, putative	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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