Gene omics information

Query gene ID	HV_CEb0003J19r2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HV_CEb0003J19r2_at	HV_CEb0003J19r2	-	-	4e+0	At3g46086	unknown protein	S.X.	H.G.	Please select
0.91	98.1	Contig18449_at	Contig18449	-	-	2e+0	At5g37640	UBQ9	S.X.	H.G.	Please select
0.73	88.7	HV_CEb0003K04f_s_at	HV_CEb0003K04f	-	-	3e+0	At5g01881	unknown protein	S.X.	H.G.	Please select
0.71	87.1	HV_CEb0023O04r2_at	HV_CEb0023O04r2	-	-	1e+0	At3g19390	cysteine proteinase, putative / thiol protease, putative	S.X.	H.G.	Please select
0.60	77.3	Contig14299_at	Contig14299	-	-	9e-1	At4g15955	epoxide hydrolase-related	S.X.	H.G.	Please select
0.53	69.7	Contig10847_at	Contig10847	-	-	2e-9	At3g62020	GLP10 (GERMIN-LIKE PROTEIN 10)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
46.0	99.9	GSM372956	genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
35.4	99.9	GSM372940	genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
33.8	99.9	GSM372938	genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
30.6	99.9	GSM372958	genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
14.0	99.5	GSM372939	genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.8	99.4	GSM311251	28-4_without_aphids_2	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
11.4	99.3	GSM310867	lina_without_aphids_3	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
10.5	99.2	GSM311252	28-4_without_aphids_3	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
10.3	99.1	GSM372974	genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
9.7	99.0	GSM372997	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.09	2e-9	61	Contig6581_at	Contig6581	-	-	6e-2	At3g26330	CYP71B37	C.G.	S.X.	Please select
0.04	8e-6	50	Contig15786_at	Contig15786	-	-	1e-4	At3g61880	CYP78A9 (CYTOCHROME P450 78A9)	C.G.	S.X.	Please select
0.04	5e-4	44	Contig7389_at	Contig7389	-	-	1e-2	At3g26180	CYP71B20	C.G.	S.X.	Please select
0.06	2e-3	42	Contig26116_at	Contig26116	-	-	1e+0	At3g26300	CYP71B34	C.G.	S.X.	Please select
0.07	2e-3	42	Contig18990_at	Contig18990	-	-	7e+0	At5g40600	unknown protein	C.G.	S.X.	Please select
0.05	2e-3	42	Contig12571_at	Contig12571	-	-	3e+0	At5g37520	unknown protein	C.G.	S.X.	Please select
0.03	8e-3	40	Contig11969_at	Contig11969	-	-	2e-6	At5g04330	cytochrome P450, putative / ferulate-5-hydroxylase, putative	C.G.	S.X.	Please select
0.14	3e-2	38	Contig19640_at	Contig19640	-	-	6e-2	At2g25260	unknown protein	C.G.	S.X.	Please select
0.05	1e-1	36	Contig17320_at	Contig17320	-	-	1e-1	At3g61040	CYP76C7	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	4e+0	32	Arabidopsis thaliana	At3g46086	6240690	unknown protein	F:unknown;P:unknown;C:unknown	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+1	30	Glycine max	PsAffx.psZS012xL07f_at	PsAffx.psZS012xL07f	-	-	9e-4	At2g31560	unknown protein	C.G.	S.X.	Please select
0.08	1e-7	57	Oryza sativa	Os09g0441400	AK111616.1	-	Elicitor-inducible cytochrome P450	4e+0	At4g13770	CYP83A1 (CYTOCHROME P450 83A1)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	6e+0	32	Populus trichocarpa	PtpAffx.2709.2.S1_a_at	BP929265	-	-	3e+0	At5g07571	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.16	7e-8	57	Triticum aestivum	TaAffx.57561.1.S1_at	CA627082	-	-	4e+0	At5g16390	CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)	C.G.	S.X.	Please select
0.07	3e-1	34	Vitis vinifera	1609712_at	CF205577.1	hypothetical protein LOC100263428	-	1e+0	At2g19570	CDA1 (CYTIDINE DEAMINASE 1)	C.G.	S.X.	Please select
0.08	2e-3	42	Zea mays	Zm.18522.1.A1_at	CO523120	hypothetical protein LOC100192876	-	6e+0	At4g34120	LEJ1 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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