Gene omics information

Query gene ID	HV_CEa0014H05r2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	87.1	HV_CEa0014H05r2_at	HV_CEa0014H05r2	-	-	3e+0	At5g64850	unknown protein	S.X.	H.G.	Please select
0.80	92.5	Contig17900_at	Contig17900	-	-	6e+0	At4g05170	DNA binding / transcription factor	S.X.	H.G.	Please select
0.80	92.5	9507414_R_4264-4644_at	9507414_R_4264-4644	-	-	1e+1	At5g06320	NHL3	S.X.	H.G.	Please select
0.73	88.7	EBem04_SQ003_H15_at	EBem04_SQ003_H15	-	-	3e+0	At5g33806	unknown protein	S.X.	H.G.	Please select
0.61	78.7	Contig10097_at	Contig10097	-	-	4e-1	At3g16450	jacalin lectin family protein	S.X.	H.G.	Please select
0.56	74.3	HS05N06r_at	HS05N06r	-	-	9e-1	At1g79110	protein binding / zinc ion binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
19.1	99.7	GSM130806	JA and salinity stress, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
14.7	99.5	GSM130800	control, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
14.1	99.5	GSM261076	Albina e-16 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
12.6	99.4	GSM130802	salinity stress, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
10.8	99.2	GSM161221	cold treatment rep3	GSE6993	Barley low temperature stress
10.5	99.2	GSM130804	JA, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
10.4	99.2	GSM146375	Maythorpe shoot Control, biological rep1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.2	99.0	GSM130799	control, biological rep1	GSE5605	Expression data from barley under salinity stress and JA treatment
9.0	98.9	GSM161200	cold treatment rep1	GSE6993	Barley low temperature stress
8.7	98.9	GSM146377	Maythorpe shoot Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	7e-3	40	Contig19549_at	Contig19549	-	-	4e+0	At5g56470	FAD-dependent oxidoreductase family protein	C.G.	S.X.	Please select
0.01	1e-1	36	Contig10199_at	Contig10199	-	-	8e-2	At3g27940	LBD26 (LOB DOMAIN-CONTAINING PROTEIN 26)	C.G.	S.X.	Please select
0.02	1e-1	36	Contig8194_at	Contig8194	-	-	2e-7	At4g37210	tetratricopeptide repeat (TPR)-containing protein	C.G.	S.X.	Please select
0.04	2e+0	32	HV_CEb0017B21r2_at	HV_CEb0017B21r2	-	-	3e+0	Atmg00990	-	C.G.	S.X.	Please select
0.01	2e+0	32	Contig7801_at	Contig7801	-	-	9e-1	At3g16760	tetratricopeptide repeat (TPR)-containing protein	C.G.	S.X.	Please select
0.01	2e+0	32	Contig5736_at	Contig5736	-	-	7e-30	At3g11710	ATKRS-1 (ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 1)	C.G.	S.X.	Please select
0.02	2e+0	32	Contig14022_at	Contig14022	-	-	8e-1	At1g54980	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig14931_at	Contig14931	-	-	1e-26	At2g31010	protein kinase family protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig14019_at	Contig14019	-	-	2e-16	At2g04650	ADP-glucose pyrophosphorylase family protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	3e+0	32	Arabidopsis thaliana	At5g64850	836608	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.19	2e-15	83	Glycine max	Gma.3434.1.S1_at	CD405303	-	-	1e-42	At1g63680	MURE	C.G.	S.X.	Please select
0.12	1e-53	210	Oryza sativa	Os10g0548900	AK067162.1	-	Cytoplasmic peptidoglycan synthetase, N-terminaldomain containing protein	3e-7	At1g63680	MURE	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.11	1e-6	54	Populus trichocarpa	PtpAffx.200421.1.S1_at	pmrna846	hypothetical protein	-	2e-88	At1g63680	MURE	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.80	6e-147	519	Triticum aestivum	Ta.4491.1.S1_at	BJ267128	-	-	5e-2	At1g63680	MURE	C.G.	S.X.	Please select
0.03	1e+0	32	Vitis vinifera	1622775_at	CF415430	hypothetical protein LOC100241371	-	3e-7	At4g00570	malate oxidoreductase, putative	C.G.	S.X.	Please select
0.03	2e+0	32	Zea mays	Zm.9824.1.A1_at	BM340190	-	-	5e+0	At5g15910	dehydrogenase-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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