Gene omics information

Query gene ID	HV_CEa0009C07r2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.98	100.0	HV_CEa0009C07r2_at	HV_CEa0009C07r2	-	-	3e-1	At5g65510	AIL7 (AINTEGUMENTA-like 7)	S.X.	H.G.	Please select
0.64	80.9	HV14B03u_at	HV14B03u	-	-	3e+0	At4g36170	unknown protein	S.X.	H.G.	Please select
0.60	77.3	Contig23856_at	Contig23856	-	-	1e+0	At1g67590	remorin family protein	S.X.	H.G.	Please select
0.54	70.3	Contig13509_at	Contig13509	-	-	5e+0	At5g54600	50S ribosomal protein L24, chloroplast (CL24)	S.X.	H.G.	Please select
0.48	63.2	Contig20409_at	Contig20409	-	-	2e-1	At1g49230	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.44	58.9	HT06B11r_at	HT06B11r	-	-	3e-1	At3g48344	unknown protein	S.X.	H.G.	Please select
0.40	53.1	Contig13380_at	Contig13380	-	-	2e-2	At4g19270	unknown protein	S.X.	H.G.	Please select
0.39	50.5	EBro08_SQ004_I03_at	EBro08_SQ004_I03	-	-	5e+0	At4g34750	auxin-responsive protein, putative / small auxin up RNA (SAUR_E)	S.X.	H.G.	Please select
0.35	45.1	HW05P14u_at	HW05P14u	-	-	2e-1	At1g64830	aspartyl protease family protein	S.X.	H.G.	Please select
0.35	45.1	rbaal17m22_at	rbaal17m22	-	-	3e-1	At5g28615	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
23.8	99.8	GSM261041	Dicktoo-deacclimation-rep3	GSE10329	Low temperature stress in cv. Dicktoo
23.0	99.8	GSM261040	Dicktoo-deacclimation-rep2	GSE10329	Low temperature stress in cv. Dicktoo
21.0	99.7	GSM261032	Dicktoo control-rep3	GSE10329	Low temperature stress in cv. Dicktoo
16.7	99.6	GSM261030	Dicktoo-control-rep1	GSE10329	Low temperature stress in cv. Dicktoo
12.3	99.4	GSM398283	Moroc9-75_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
11.5	99.3	GSM398267	HS41-1_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
11.3	99.3	GSM398281	Moroc9-75_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
9.5	99.0	GSM398270	HS41-1_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.9	98.9	GSM398268	HS41-1_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.4	98.8	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.36	4e-122	436	Contig18674_at	Contig18674	-	-	5e-1	At1g67050	unknown protein	C.G.	S.X.	Please select
0.22	4e-20	97	Contig20257_at	Contig20257	-	-	3e-1	At5g50915	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select
0.03	3e-2	38	Contig12268_at	Contig12268	-	-	1e+0	At5g43175	basic helix-loop-helix (bHLH) family protein	C.G.	S.X.	Please select
0.02	1e-1	36	Contig16577_at	Contig16577	-	-	2e-3	At3g53940	mitochondrial substrate carrier family protein	C.G.	S.X.	Please select
0.04	5e-1	34	Contig9933_at	Contig9933	-	-	3e+0	At4g31010	RNA binding	C.G.	S.X.	Please select
0.02	2e+0	32	Contig11455_at	Contig11455	-	-	1e-2	At3g18165	MOS4 (Modifier of snc1,4)	C.G.	S.X.	Please select
0.03	2e+0	32	Contig17447_at	Contig17447	-	-	1e-1	At5g03795	-	C.G.	S.X.	Please select
0.02	2e+0	32	Contig17865_at	Contig17865	-	-	2e-12	At2g15270	unknown protein	C.G.	S.X.	Please select
0.02	2e+0	32	Contig13731_at	Contig13731	-	-	4e-2	At3g10380	SEC8 (SUBUNIT OF EXOCYST COMPLEX 8)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-1	36	Arabidopsis thaliana	At5g65510	836677	AIL7 (AINTEGUMENTA-like 7)	F:transcription factor activity, DNA binding;P:organ morphogenesis, regulation of transcription, DNA-dependent;C:nucleus;POB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-1	36	Glycine max	PsAffx.C229000005_at	PsAffx.C229000005	-	-	5e+0	At5g56060	ATP binding / nucleotide binding / phenylalanine-tRNA ligase	C.G.	S.X.	Please select
0.04	8e+0	32	Oryza sativa	OsAffx.2678.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	1e+0	34	Populus trichocarpa	Ptp.2931.1.S1_a_at	CK112992	hypothetical protein	-	2e-1	At3g61827	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.19	2e-11	69	Triticum aestivum	Ta.30888.1.S1_at	CN011455	-	-	1e+0	At1g05920	DNA binding	C.G.	S.X.	Please select
0.04	3e-1	34	Vitis vinifera	1619697_at	CB341291	-	-	1e-9	At4g18100	60S ribosomal protein L32 (RPL32A)	C.G.	S.X.	Please select
0.03	3e-2	38	Zea mays	Zm.9172.1.A1_at	BM267062	-	-	2e-2	At3g58970	magnesium transporter CorA-like family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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