Gene omics information

Query gene ID	HV_CEa0006M01r2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.46	61.0	HV_CEa0006M01r2_at	HV_CEa0006M01r2	-	-	3e-1	At2g27750	nucleolar matrix protein-related	S.X.	H.G.	Please select
0.50	66.9	Contig9526_at	Contig9526	-	-	2e-6	At4g34040	zinc finger (C3HC4-type RING finger) family protein	S.X.	H.G.	Please select
0.44	58.9	Contig13544_at	Contig13544	-	-	5e-2	At1g19300	PARVUS (PARVUS)	S.X.	H.G.	Please select
0.35	45.1	Contig20174_at	Contig20174	-	-	5e-3	At5g26670	pectinacetylesterase, putative	S.X.	H.G.	Please select
0.24	27.2	Contig13368_at	Contig13368	-	-	5e+0	At5g38890	exoribonuclease-related	S.X.	H.G.	Please select
0.20	21.1	Contig6120_at	Contig6120	-	-	3e-6	At3g01450	binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
19.0	99.7	GSM281747	Genotype: Steptoe - rep3	GSE11182	Steptoe x Morex seedling leaf comparison
18.3	99.7	GSM281746	Genotype: Steptoe - rep2	GSE11182	Steptoe x Morex seedling leaf comparison
16.3	99.6	GSM281745	Genotype: Steptoe - rep1	GSE11182	Steptoe x Morex seedling leaf comparison
15.1	99.5	GSM372974	genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
14.7	99.5	GSM372997	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
14.6	99.5	GSM372992	genotype: 11542 - pathogen isolates: K1 - time: 0 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
13.9	99.5	GSM372958	genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
13.8	99.5	GSM363463	5 mM B(OH)3 treatment (5B) - rep1	GSE14521	Late response to boron toxicity in barley leaves
10.1	99.1	GSM281748	Genotype: Morex - rep1	GSE11182	Steptoe x Morex seedling leaf comparison
9.9	99.1	GSM281749	Genotype: Morex - rep2	GSE11182	Steptoe x Morex seedling leaf comparison

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.47	0	912	Contig14823_at	Contig14823	-	-	8e-1	At1g21350	antioxidant/ oxidoreductase	C.G.	S.X.	Please select
0.47	0	912	Contig14823_s_at	Contig14823	-	-	8e-1	At1g21350	antioxidant/ oxidoreductase	C.G.	S.X.	Please select
0.21	6e-38	157	Contig9397_at	Contig9397	-	-	2e-4	At1g22370	AtUGT85A5 (UDP-glucosyl transferase 85A5)	C.G.	S.X.	Please select
0.22	3e-27	121	EBro02_SQ001_G03_s_at	EBro02_SQ001_G03	-	-	8e-1	At5g39730	avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related	C.G.	S.X.	Please select
0.22	3e-27	121	EBro02_SQ001_G03_at	EBro02_SQ001_G03	-	-	8e-1	At5g39730	avirulence-responsive protein-related / avirulence induced gene (AIG) protein-related	C.G.	S.X.	Please select
0.25	1e-26	119	HV12J05u_at	HV12J05u	-	-	1e+0	At3g52360	unknown protein	C.G.	S.X.	Please select
0.11	6e-4	44	Contig14081_at	Contig14081	-	-	1e-1	At1g22340	AtUGT85A7 (UDP-glucosyl transferase 85A7)	C.G.	S.X.	Please select
0.01	2e-3	42	Contig5706_at	Contig5706	cellulose synthase-like CslF6	-	8e-2	At5g11600	unknown protein	C.G.	S.X.	Please select
0.02	1e-1	36	Contig13982_at	Contig13982	-	-	2e-4	At4g15480	UGT84A1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-1	36	Arabidopsis thaliana	At2g27750	817321	nucleolar matrix protein-related	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPB	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	4e-1	36	Glycine max	HgAffx.23749.1.S1_at	CB375891	-	-	4e+0	At2g19890	unknown protein	C.G.	S.X.	Please select
0.25	2e-47	190	Oryza sativa	Os02g0755900	AK104985.1	-	UDP-glucuronosyl/UDP-glucosyltransferase familyprotein	8e-1	At1g22340	AtUGT85A7 (UDP-glucosyl transferase 85A7)	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+0	34	Populus trichocarpa	PtpAffx.203393.1.S1_at	pmrna6749	hypothetical protein	-	2e-7	At5g13290	CRN (CORYNE)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.38	8e-42	171	Triticum aestivum	Ta.1120.1.S1_x_at	CA659877	-	-	1e+0	At3g52360	unknown protein	C.G.	S.X.	Please select
0.04	1e+0	32	Vitis vinifera	1621192_at	CF516648	hypothetical protein LOC100248705	-	4e+0	At2g27920	SCPL51 (SERINE CARBOXYPEPTIDASE-LIKE 51)	C.G.	S.X.	Please select
0.09	1e-1	36	Zea mays	Zm.9570.1.A1_a_at	BM337218	hypothetical protein LOC100279354	-	2e+1	Atcg00330	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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