Gene omics information

Query gene ID	HV_CEa0003B14r2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	74.9	HV_CEa0003B14r2_at	HV_CEa0003B14r2	-	-	8e-1	At4g24026	unknown protein	S.X.	H.G.	Please select
0.60	77.3	Contig9075_s_at	Contig9075	-	-	1e-1	At5g59990	-	S.X.	H.G.	Please select
0.55	72.0	Contig13704_at	Contig13704	-	-	2e+0	At5g56100	glycine-rich protein / oleosin	S.X.	H.G.	Please select
0.53	69.7	Contig12085_at	Contig12085	-	-	1e-2	At5g63260	zinc finger (CCCH-type) family protein	S.X.	H.G.	Please select
0.46	61.0	Contig20962_at	Contig20962	-	-	9e-9	At2g33820	MBAC1	S.X.	H.G.	Please select
0.38	49.5	Contig19683_at	Contig19683	-	-	1e+0	At3g24820	BSD domain-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
5.3	97.4	GSM160822	38% SWC rep3	GSE6990	Barley drought stress
4.7	96.9	GSM261041	Dicktoo-deacclimation-rep3	GSE10329	Low temperature stress in cv. Dicktoo
4.5	96.7	GSM372968	genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.1	96.2	GSM372953	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.0	96.0	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.9	95.8	GSM261071	Albina f-17 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.9	95.8	GSM372977	genotype: 11542 - pathogen isolates: 5874 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.8	95.7	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.5	95.1	GSM372945	genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	3e-2	38	Contig14144_at	Contig14144	-	-	4e-2	At3g19900	unknown protein	C.G.	S.X.	Please select
0.04	3e-2	38	Contig13660_at	Contig13660	-	-	8e-5	At4g10810	unknown protein	C.G.	S.X.	Please select
0.03	3e-2	38	Contig9696_s_at	Contig9696	-	-	1e-1	At1g21680	-	C.G.	S.X.	Please select
0.02	3e-2	38	Contig7697_at	Contig7697	-	-	3e+0	At5g23210	SCPL34	C.G.	S.X.	Please select
0.04	1e-1	36	EBro03_SQ005_O21_x_at	EBro03_SQ005_O21	-	-	4e+0	At5g18380	40S ribosomal protein S16 (RPS16C)	C.G.	S.X.	Please select
0.04	1e-1	36	EBro03_SQ005_O21_s_at	EBro03_SQ005_O21	-	-	4e+0	At5g18380	40S ribosomal protein S16 (RPS16C)	C.G.	S.X.	Please select
0.03	1e-1	36	Contig12778_at	Contig12778	-	-	2e-3	At1g76730	5-formyltetrahydrofolate cyclo-ligase family protein	C.G.	S.X.	Please select
0.03	1e-1	36	Contig7787_at	Contig7787	-	-	2e+0	At4g21920	unknown protein	C.G.	S.X.	Please select
0.02	1e-1	36	Contig9587_at	Contig9587	-	-	2e-10	At2g25670	unknown protein	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.06	8e-1	34	Arabidopsis thaliana	At4g24026	6240360	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	5e-3	42	Glycine max	GmaAffx.35376.1.S1_s_at	BE583904	-	-	1e+1	At4g30180	transcription factor/ transcription regulator	C.G.	S.X.	Please select
0.05	7e-3	42	Oryza sativa	OsAffx.19429.1.S1_x_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	1e+0	34	Populus trichocarpa	PtpAffx.43837.1.A1_s_at	CV256587	hypothetical protein	-	3e-6	At4g24026	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.50	5e-67	254	Triticum aestivum	Ta.27872.1.A1_at	CD881326	-	-	1e+0	At5g27247	unknown protein	C.G.	S.X.	Please select
0.04	2e-1	34	Vitis vinifera	1612315_at	CB347014	hypothetical protein LOC100256046	-	3e-29	At5g50460	protein transport protein SEC61 gamma subunit, putative	C.G.	S.X.	Please select
0.05	4e-1	34	Zea mays	ZmAffx.821.1.A1_at	AI770497	-	-	3e+0	At3g21840	ASK7 (ARABIDOPSIS SKP1-LIKE 7)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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