Gene omics information

Query gene ID HVSMEn0014H06r2_s_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9799.6HVSMEn0014H06r2_s_atHVSMEn0014H06r2--4e-2At3g02150PTF1 (PLASTID TRANSCRIPTION FACTOR 1)S.X.H.G.
0.5470.3Contig11107_atContig11107--7e-4At2g45140PVA12 (PLANT VAP HOMOLOG 12)S.X.H.G.
0.4963.7Contig17929_atContig17929--2e+1Atmg01370-S.X.H.G.
0.4255.2Contig1952_atContig1952--7e-20At2g13360AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE)S.X.H.G.
0.4255.2Contig162_x_atContig162--3e+0At1g68945unknown proteinS.X.H.G.
0.4153.9Contig18051_atContig18051--4e-1At1g75250ATRL6 (ARABIDOPSIS RAD-LIKE 6)S.X.H.G.
0.4053.1Contig10389_atContig10389--2e+0At5g67490unknown proteinS.X.H.G.
0.3950.5Contig16156_s_atContig16156--1e-4At1g71010phosphatidylinositol-4-phosphate 5-kinase family proteinS.X.H.G.
0.3849.5Contig11867_s_atContig11867--4e-1At1g03790SOM (SOMNUS)S.X.H.G.
0.3849.5Contig397_x_atContig397--0At1g07920elongation factor 1-alpha / EF-1-alphaS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
44.599.9GSM261054Bonus Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
35.999.9GSM161220cold treatment rep2GSE6993Barley low temperature stress
34.799.9GSM261053Bonus Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
24.899.8GSM261055Bonus Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
20.799.7GSM161200cold treatment rep1GSE6993Barley low temperature stress
19.499.7GSM1608317% SWC rep1GSE6990Barley drought stress
18.099.7GSM161221cold treatment rep3GSE6993Barley low temperature stress
17.799.7GSM16082619% SWC rep3GSE6990Barley drought stress
14.999.5GSM261036Dicktoo-subzero-rep1GSE10329Low temperature stress in cv. Dicktoo
11.099.2GSM261033Dicktoo-chilling-rep1GSE10329Low temperature stress in cv. Dicktoo
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.642e-79293Contig13653_atContig13653--4e+0At4g18080unknown proteinC.G.S.X.
0.222e-1477Contig4521_s_atContig4521--4e-1At3g60280UCC3 (UCLACYANIN 3)C.G.S.X.
0.057e-236Contig11527_atContig11527--1e+0At1g76930ATEXT4 (EXTENSIN 4)C.G.S.X.
0.047e-236Contig11528_atContig11528--4e-1At5g44570unknown proteinC.G.S.X.
0.047e-236Contig11528_s_atContig11528--4e-1At5g44570unknown proteinC.G.S.X.
0.027e-236Contig6728_atContig6728--6e-1At5g23030TET12 (TETRASPANIN12)C.G.S.X.
0.023e-134Contig3907_atContig3907--6e-10At5g41340UBC4 (UBIQUITIN CONJUGATING ENZYME 4)C.G.S.X.
0.043e-134Contig12144_s_atContig12144--1e+0At5g04440unknown proteinC.G.S.X.
0.053e-134HY04C04u_atHY04C04u--7e-1At1g09490cinnamyl-alcohol dehydrogenase family / CAD familyC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.044e-238Arabidopsis thalianaAt3g02150821061PTF1 (PLASTID TRANSCRIPTION FACTOR 1)a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation.---C.G.S.X.
0.062e-136Glycine maxPsAffx.psHB027xK10f_atPsAffx.psHB027xK10f--1e-1At4g36780transcription regulatorC.G.S.X.
0.047e-238Oryza sativaOs10g0338900NM_195845.1--3e-1At5g26673-C.G.S.X.
0.048e-134Populus trichocarpaPtpAffx.5887.1.S1_a_atCV257443hypothetical protein-6e-6At5g63270nitrate-responsive NOI protein, putativeC.G.S.X.
0.302e-1375Triticum aestivumTa.3475.1.A1_atCK206362fructan:fructan 1-fructosyltransferase-1e-1At2g39520unknown proteinC.G.S.X.
0.062e-134Vitis vinifera1618310_s_atCF210664hypothetical protein LOC100259803-1e-1At3g01970WRKY45C.G.S.X.
0.034e+030Zea maysZm.7457.1.A1_atBM078465cold shock protein-1-1e+0At5g40645nitrate-responsive NOI protein, putativeC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage