Gene omics information

Query gene ID HVSMEn0012P04f2_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9498.9HVSMEn0012P04f2_atHVSMEn0012P04f2--2e-1At3g63030MBD4S.X.H.G.
0.6885.1HF22K12r_atHF22K12r--5e+0At5g23680sterile alpha motif (SAM) domain-containing proteinS.X.H.G.
0.6380.3HB25J22r_x_atHB25J22r--9e+0At5g04790unknown proteinS.X.H.G.
0.5268.3Contig13375_atContig13375--3e-1At5g55750hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.5167.5Contig7312_s_atContig7312--7e-2At2g32650-S.X.H.G.
0.5066.9Contig21007_atContig21007--1e+0At2g27520F-box family proteinS.X.H.G.
0.4661.0Contig3371_atContig3371--6e-7At1g62710BETA-VPE (BETA VACUOLAR PROCESSING ENZYME)S.X.H.G.
0.4255.2Contig4155_atContig4155--2e-38At5g54310AGD5 (ARF-GAP domain 5)S.X.H.G.
0.4053.1Contig14781_atContig14781--1e+0At5g18970AWPM-19-like membrane family proteinS.X.H.G.
0.3849.5Contig10576_atContig10576--1e-21At4g33080protein kinase, putativeS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
15.099.5GSM261027ABA-Late-rep1GSE10328ABA experiment
12.199.3GSM261051Bonus Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
11.799.3GSM261028ABA-Late-rep2GSE10328ABA experiment
11.099.2GSM688903 h control replicate 2GSE3097Barley1 salinity stress study
10.299.1GSM261025ABA-Early-rep2GSE10328ABA experiment
9.198.9GSM6890427 h salt stressed replicate 1GSE3097Barley1 salinity stress study
8.798.9GSM688893 h control replicate 1GSE3097Barley1 salinity stress study
7.998.7GSM398261HS41-1_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.898.6GSM160464drought control rep1GSE6990Barley drought stress
7.598.6GSM261024ABA-Early-rep1GSE10328ABA experiment
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e-238Contig3907_atContig3907--6e-10At5g41340UBC4 (UBIQUITIN CONJUGATING ENZYME 4)C.G.S.X.
0.052e-238HC108A06_SK_atHC108A06_SK--8e-1At5g58280transcriptional factor B3 family proteinC.G.S.X.
0.032e-238Contig3906_s_atContig3906--1e-7At5g41340UBC4 (UBIQUITIN CONJUGATING ENZYME 4)C.G.S.X.
0.048e-236Contig1916_s_atContig1916--2e-2At1g44575NPQ4 (NONPHOTOCHEMICAL QUENCHING)C.G.S.X.
0.038e-236Contig7490_atContig7490--2e-17At4g28480DNAJ heat shock family proteinC.G.S.X.
0.008e-236Contig21662_atContig21662--1e+0At5g11160APT5 (Adenine phosphoribosyltransferase 5)C.G.S.X.
0.048e-236HO10M16S_atHO10M16S--7e-5At5g28630glycine-rich proteinC.G.S.X.
0.023e-134Contig20125_atContig20125--3e+0At3g05540-C.G.S.X.
0.033e-134Contig21092_atContig21092--2e+0At3g27350unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-136Arabidopsis thalianaAt3g63030825478MBD4Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.---C.G.S.X.
0.066e-238Glycine maxGmaAffx.55766.1.S1_x_atBQ079492--8e-1At3g48420haloacid dehalogenase-like hydrolase family proteinC.G.S.X.
0.201e-1997Oryza sativaOs05g0427900AK067448.1-Heat shock protein DnaJ family protein4e-1At4g39410WRKY13C.G.S.X.
0.042e-136Populus trichocarpaPtpAffx.217331.1.S1_atpmrna32547hypothetical protein-1e+0At1g05290transcription factorC.G.S.X.
0.448e-90329Triticum aestivumTaAffx.36790.1.S1_atCA633206--2e+1At3g30260AGL79 (AGAMOUS-LIKE 79)C.G.S.X.
0.055e-236Vitis vinifera1607408_atCF216013--2e-1At1g10720BSD domain-containing proteinC.G.S.X.
0.043e-134Zea maysZm.3389.1.S1_atBI430595hypothetical protein LOC100275296-2e-5At5g20165unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage