Gene omics information

Query gene ID	HVSMEm0008L21r2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.50	66.9	HVSMEm0008L21r2_at	HVSMEm0008L21r2	-	-	5e+0	At3g05020	ACP1 (acyl carrier protein 1)	S.X.	H.G.	Please select
0.44	58.9	Contig15918_at	Contig15918	-	-	2e+0	At5g43285	-	S.X.	H.G.	Please select
0.42	55.2	Contig12759_at	Contig12759	-	-	7e-19	At4g33030	SQD1	S.X.	H.G.	Please select
0.40	53.1	Contig5766_at	Contig5766	-	-	7e-7	At2g24060	translation initiation factor 3 (IF-3) family protein	S.X.	H.G.	Please select
0.38	49.5	Contig6933_s_at	Contig6933	-	-	3e-1	At3g56340	40S ribosomal protein S26 (RPS26C)	S.X.	H.G.	Please select
0.32	40.3	Contig14020_at	Contig14020	-	-	4e-7	At3g18170	transferase, transferring glycosyl groups	S.X.	H.G.	Please select
0.31	38.6	HVSMEl0002K19r2_at	HVSMEl0002K19r2	-	-	7e+0	At4g31790	diphthine synthase, putative (DPH5)	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
87.3	100.0	GSM398253	Martin_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
50.1	99.9	GSM398265	HS41-1_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
42.6	99.9	GSM398264	HS41-1_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
40.9	99.9	GSM398261	HS41-1_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
17.8	99.7	GSM398249	Martin_0d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
16.9	99.6	GSM398280	Moroc9-75_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
16.8	99.6	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
11.2	99.2	GSM311263	kara_without_aphids_2	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
10.3	99.1	GSM398256	Martin_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.9	98.9	GSM311253	hsp5_with_aphids_1	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	2e+0	32	Contig7162_at	Contig7162	-	-	2e-11	At2g41620	nucleoporin interacting component family protein	C.G.	S.X.	Please select
0.01	2e+0	32	Contig14068_at	Contig14068	-	-	2e-8	At1g16970	KU70 (ARABIDOPSIS THALIANA KU70 HOMOLOG)	C.G.	S.X.	Please select
0.01	2e+0	32	Contig3982_at	Contig3982	-	-	1e-83	At5g37510	EMB1467 (embryo defective 1467)	C.G.	S.X.	Please select
0.03	1e+1	30	HU14P01u_at	HU14P01u	-	-	1e+0	At2g23430	ICK1	C.G.	S.X.	Please select
0.02	1e+1	30	Contig6056_s_at	Contig6056	-	-	7e-19	At3g13670	protein kinase family protein	C.G.	S.X.	Please select
0.03	1e+1	30	rbags16d08_at	rbags16d08	-	-	3e+0	At4g14630	GLP9 (GERMIN-LIKE PROTEIN 9)	C.G.	S.X.	Please select
0.02	1e+1	30	Contig14364_s_at	Contig14364	-	-	2e+0	At5g03850	40S ribosomal protein S28 (RPS28B)	C.G.	S.X.	Please select
0.03	1e+1	30	Contig9042_x_at	Contig9042	-	-	3e+0	At3g56580	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.03	1e+1	30	rbags16d08_s_at	rbags16d08	-	-	3e+0	At4g14630	GLP9 (GERMIN-LIKE PROTEIN 9)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	5e+0	32	Arabidopsis thaliana	At3g05020	819664	ACP1 (acyl carrier protein 1)	encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Protein is not regulated by light.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	5e-1	36	Glycine max	GmaAffx.61052.1.S1_at	BU965381	-	-	2e-1	At4g04614	unknown protein	C.G.	S.X.	Please select
0.03	1e+1	32	Oryza sativa	Os09g0118900	9637.m00150	-	-	3e-1	At5g35920	CYP79A4P	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	2e+0	34	Populus trichocarpa	Ptp.1847.1.A1_s_at	CK093485	hypothetical protein	-	7e-17	At2g23070	casein kinase II alpha chain, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	9e-2	38	Triticum aestivum	TaAffx.56292.1.S1_at	CA654684	-	-	4e+0	At3g43570	GDSL-motif lipase, putative	C.G.	S.X.	Please select
0.03	2e+0	32	Vitis vinifera	1613961_at	CF404551	hypothetical protein LOC100253700	-	7e-5	At1g12010	1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative	C.G.	S.X.	Please select
0.03	9e+0	30	Zea mays	ZmAffx.1193.1.A1_at	BE025345	-	-	3e+0	At3g13140	hydroxyproline-rich glycoprotein family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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