Gene omics information

Query gene ID	HVSMEm0007D17r2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.71	87.1	HVSMEm0007D17r2_at	HVSMEm0007D17r2	-	-	5e+0	At5g59050	unknown protein	S.X.	H.G.	Please select
0.29	35.5	Contig7564_at	Contig7564	-	-	4e-5	At2g32080	PUR ALPHA-1	S.X.	H.G.	Please select
0.09	7.4	HY07F05u_x_at	HY07F05u	-	-	9e+0	At4g26288	-	S.X.	H.G.	Please select
0.09	7.4	Contig17061_at	Contig17061	-	-	2e+0	At5g27940	WPP3 (WPP domain protein 3)	S.X.	H.G.	Please select
0.08	6.5	Contig25746_at	Contig25746	-	-	4e-1	At3g59620	-	S.X.	H.G.	Please select
0.08	6.5	AF016328_at	AF016328	-	-	7e-2	At1g75050	-	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
9.8	99.1	GSM238426	Endosperm 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
8.5	98.8	GSM398264	HS41-1_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.4	98.8	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.0	98.4	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
5.3	97.4	GSM68898	8 h salt stressed replicate 1	GSE3097	Barley1 salinity stress study
5.2	97.4	GSM372942	genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.1	97.3	GSM68904	27 h salt stressed replicate 1	GSE3097	Barley1 salinity stress study
4.5	96.7	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
4.2	96.3	GSM261024	ABA-Early-rep1	GSE10328	ABA experiment
4.2	96.3	GSM261021	ABA-Control-rep1	GSE10328	ABA experiment

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e-1	36	Contig5141_at	Contig5141	-	-	3e-5	At5g15450	CLPB3 (CASEIN LYTIC PROTEINASE B3)	C.G.	S.X.	Please select
0.02	6e-1	34	Contig8812_s_at	Contig8812	-	-	2e+0	At2g03710	SEP4 (SEPALLATA 4)	C.G.	S.X.	Please select
0.02	6e-1	34	Contig8811_at	Contig8811	-	-	2e+0	At5g26170	WRKY50	C.G.	S.X.	Please select
0.02	6e-1	34	Contig13554_at	Contig13554	-	-	5e-2	At4g29380	protein kinase family protein / WD-40 repeat family protein	C.G.	S.X.	Please select
0.01	6e-1	34	Contig9634_at	Contig9634	-	-	1e+0	At5g13750	ZIFL1 (ZINC INDUCED FACILITATOR-like 1)	C.G.	S.X.	Please select
0.02	6e-1	34	Contig8812_x_at	Contig8812	-	-	2e+0	At2g03710	SEP4 (SEPALLATA 4)	C.G.	S.X.	Please select
0.03	2e+0	32	Contig6188_s_at	Contig6188	-	-	1e+0	At3g12480	NF-YC11 (NUCLEAR FACTOR Y, SUBUNIT C11)	C.G.	S.X.	Please select
0.01	2e+0	32	Contig13293_at	Contig13293	-	-	7e-2	At1g21650	ATP binding / protein binding	C.G.	S.X.	Please select
0.02	2e+0	32	Contig13491_at	Contig13491	-	-	2e+0	At3g02493	RTFL19 (ROTUNDIFOLIA LIKE 19)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	5e+0	32	Arabidopsis thaliana	At5g59050	836022	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	7e+0	32	Glycine max	PsAffx.psMC009xK03f_at	PsAffx.psMC009xK03f	-	-	3e+0	At5g11070	unknown protein	C.G.	S.X.	Please select
0.04	9e+0	32	Oryza sativa	OsAffx.28139.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.03	2e+0	34	Populus trichocarpa	PtpAffx.100195.1.S1_a_at	CX173256	hypothetical protein	-	1e-22	At2g29630	THIC (ThiaminC)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.03	1e+0	34	Triticum aestivum	Ta.23967.1.S1_x_at	CD900389	alpha2 purothionin	-	1e+0	At4g22370	unknown protein	C.G.	S.X.	Please select
0.04	3e-1	34	Vitis vinifera	1619009_at	CD008864	-	-	4e+0	At5g55640	unknown protein	C.G.	S.X.	Please select
0.04	8e+0	30	Zea mays	Zm.5962.5.S1_at	AI665959	Glyoxalase I	-	5e-7	At1g11840	ATGLX1 (GLYOXALASE I HOMOLOG)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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