Gene omics information

Query gene ID HVSMEm0005J13r2_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5066.9HVSMEm0005J13r2_atHVSMEm0005J13r2--3e-4At3g03800SYP131 (SYNTAXIN OF PLANTS 131)S.X.H.G.
0.6380.3Contig14455_atContig14455--4e-16At1g75760ER lumen protein retaining receptor family proteinS.X.H.G.
0.5975.8Contig19631_atContig19631--4e-1At2g04880ZAP1 (ZINC-DEPENDENT ACTIVATOR PROTEIN-1)S.X.H.G.
0.5066.9Contig12406_atContig12406--2e-7At1g76850SEC5A (EXOCYST COMPLEX COMPONENT SEC5)S.X.H.G.
0.4762.2Contig13187_atContig13187--1e-2At1g67320DNA primase, large subunit familyS.X.H.G.
0.2935.5EBro03_SQ005_C24_s_atEBro03_SQ005_C24--4e+0At5g40180unknown proteinS.X.H.G.
0.2224.2Contig26418_atContig26418--2e+0At4g32260ATP synthase familyS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
24.999.8GSM382234Root_Hg3GSE15295Mercury toxicity in barley roots
13.799.5GSM382233Root_Hg2GSE15295Mercury toxicity in barley roots
13.099.4GSM382232Root_Hg1GSE15295Mercury toxicity in barley roots
11.799.3GSM382237Root_Control3GSE15295Mercury toxicity in barley roots
9.399.0GSM382236Root_Control2GSE15295Mercury toxicity in barley roots
8.898.9GSM382235Root_Control1GSE15295Mercury toxicity in barley roots
7.398.5GSM372966genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.798.3GSM372945genotype: Mla6 - pathogen isolates: 5874 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
6.698.2GSM372967genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.097.2GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.525e-103373EBpi01_SQ001_B04_s_atEBpi01_SQ001_B04--8e+0At5g49380-C.G.S.X.
0.036e-134Contig22370_atContig22370--5e-3At1g29160Dof-type zinc finger domain-containing proteinC.G.S.X.
0.036e-134Contig22314_atContig22314--5e+0At3g26770short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.032e+032HVSMEn0012L05r2_atHVSMEn0012L05r2--7e-2At5g08520myb family transcription factorC.G.S.X.
0.022e+032Contig13788_atContig13788--3e+0At3g18215unknown proteinC.G.S.X.
0.012e+032Contig5344_atContig5344--2e-8At5g01220SQD2 (sulfoquinovosyldiacylglycerol 2)C.G.S.X.
0.012e+032Contig13205_atContig13205--8e-10At2g40650pre-mRNA splicing factor PRP38 family proteinC.G.S.X.
0.022e+032Contig9440_s_atContig9440--4e-4At3g18760ribosomal protein S6 family proteinC.G.S.X.
0.032e+032HVSMEi0008J09r2_x_atHVSMEi0008J09r2--2e-1At5g13850NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.043e-446Arabidopsis thalianaAt3g03800821141SYP131 (SYNTAXIN OF PLANTS 131)member of SYP13 Gene Family---C.G.S.X.
0.037e-342Glycine maxGmaAffx.57881.1.S1_atBI498083--8e-3At5g08080SYP132 (SYNTAXIN OF PLANTS 132)C.G.S.X.
0.273e-61236Oryza sativaOs06g0168500AK100316.1-Syntaxin-like protein (Fragment)3e-6At3g03800SYP131 (SYNTAXIN OF PLANTS 131)C.G.S.X.
0.041e-448Populus trichocarpaPtpAffx.58146.1.S1_atCV261342hypothetical protein-6e-63At5g08080SYP132 (SYNTAXIN OF PLANTS 132)C.G.S.X.
0.472e-175615Triticum aestivumTa.5302.1.S1_atBJ285699--6e-7At3g03800SYP131 (SYNTAXIN OF PLANTS 131)C.G.S.X.
0.035e+030Vitis vinifera1621204_atCF513600--3e-1At5g57860ubiquitin family proteinC.G.S.X.
0.105e-134Zea maysZm.9852.1.A1_atBM381073syntaxin 121-5e-3At5g63740zinc finger protein-relatedC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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