CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID HVSMEl0015K12f_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 72.0 HVSMEl0015K12f_at HVSMEl0015K12f - - 4e+0 At5g24370 invertase/pectin methylesterase inhibitor family protein S.X. H.G.
0.80 92.5 Contig4462_at Contig4462 - - 3e-3 At2g18162 CPuORF1 (Conserved peptide upstream open reading frame 1) S.X. H.G.
0.71 87.1 Contig3622_s_at Contig3622 aleurone specific protein - 2e-2 At3g46900 COPT2 S.X. H.G.
0.59 75.8 Contig12238_at Contig12238 - - 5e-5 At5g48160 OBE2 (OBERON2) S.X. H.G.
0.59 75.8 Contig6968_at Contig6968 - - 8e-19 At3g22830 AT-HSFA6B S.X. H.G.
0.44 58.9 Contig13821_at Contig13821 - - 5e-4 At2g48010 RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
51.1 99.9 GSM146362 Golden Promise Root Salt, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
50.5 99.9 GSM146368 Maythorpe Root Salt, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
50.2 99.9 GSM146359 Golden Promise Root Control, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
41.4 99.9 GSM146365 Maythorpe Root Control, biological rep 3 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
19.5 99.7 GSM146361 Golden Promise Root Salt, biological rep 2 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
16.7 99.6 GSM146358 Golden Promise Root Control, biological rep 2 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
15.7 99.6 GSM146364 Maythorpe Root Control, biological rep 2 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
12.0 99.3 GSM146366 Maythorpe Root Salt, biological rep 1 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
11.6 99.3 GSM146367 Maythorpe Root Salt, biological rep 2 GSE6325 Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
11.2 99.2 GSM282041 Control_dryseed_Morex_rep2 GSE11200 Expression data from malting barley seeds
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 3e-8 57 Contig20187_s_at Contig20187 - - 7e-3 At5g09640 SCPL19 C.G. S.X.
0.03 1e-1 36 Contig25330_at Contig25330 - - 1e+0 At1g73280 scpl3 (serine carboxypeptidase-like 3) C.G. S.X.
0.03 1e-1 36 Contig25330_s_at Contig25330 - - 1e+0 At1g73280 scpl3 (serine carboxypeptidase-like 3) C.G. S.X.
0.04 5e-1 34 HV_CEb0015D22r2_at HV_CEb0015D22r2 - - 3e-1 At3g53570 AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1) C.G. S.X.
0.03 5e-1 34 Contig25694_at Contig25694 - - 2e+0 At4g12860 UNE14 (unfertilized embryo sac 14) C.G. S.X.
0.05 5e-1 34 Contig17621_at Contig17621 - - 1e-1 At1g73310 scpl4 (serine carboxypeptidase-like 4) C.G. S.X.
0.04 2e+0 32 HB32A23r_at HB32A23r - - 2e+0 At2g06000 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.02 2e+0 32 Contig12041_at Contig12041 - - 1e-1 At2g23440 unknown protein C.G. S.X.
0.03 2e+0 32 Contig224_s_at Contig224 - - 5e+0 At5g62640 proline-rich family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At5g24370 832508 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.04 9e-2 38 Glycine max GmaAffx.50673.2.S1_s_at BI787147 NAC domain protein - 1e-33 At5g08790 ATAF2 C.G. S.X.
0.26 2e-13 77 Oryza sativa OsAffx.31104.1.S1_at - - - 0 C.G. S.X.
0.04 1e+0 34 Populus trichocarpa PtpAffx.214724.1.S1_s_at pmrna28552 hypothetical protein - 5e-10 At3g25420 scpl21 (serine carboxypeptidase-like 21) C.G. S.X.
0.55 2e-54 212 Triticum aestivum TaAffx.119683.1.A1_at BJ262615 - - 4e+0 At5g38110 ASF1B (ANTI- SILENCING FUNCTION 1B) C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1615690_at CD715586 - - 9e-10 At4g12910 scpl20 (serine carboxypeptidase-like 20) C.G. S.X.
0.03 7e+0 30 Zea mays ZmAffx.225.1.A1_at AI670237 - - 1e+1 At5g09470 mitochondrial substrate carrier family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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