Gene omics information

Query gene ID	HVSMEl0011L15f2_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.63	80.3	HVSMEl0011L15f2_s_at	HVSMEl0011L15f2	-	-	4e-2	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	S.X.	H.G.	Please select
0.57	74.9	Contig9703_at	Contig9703	-	-	3e+0	At2g37200	integral membrane protein, putative	S.X.	H.G.	Please select
0.56	74.3	Contig17513_at	Contig17513	-	-	4e-4	At5g06600	UBP12 (UBIQUITIN-SPECIFIC PROTEASE 12)	S.X.	H.G.	Please select
0.53	69.7	Contig17523_at	Contig17523	-	-	7e-2	At4g08230	glycine-rich protein	S.X.	H.G.	Please select
0.50	66.9	Contig4591_at	Contig4591	-	-	4e-2	At4g22890	PGR5-LIKE A	S.X.	H.G.	Please select
0.46	61.0	HM02P13u_s_at	HM02P13u	-	-	6e+0	At5g47980	transferase family protein	S.X.	H.G.	Please select
0.31	38.6	Contig22861_at	Contig22861	-	-	7e+0	At3g59880	unknown protein	S.X.	H.G.	Please select
0.28	35.5	Contig23565_at	Contig23565	-	-	2e+0	At4g14819	unknown protein	S.X.	H.G.	Please select
0.24	27.2	HW08B21u_s_at	HW08B21u	-	-	1e+1	At5g23903	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
6.1	98.0	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds
6.0	97.9	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
5.0	97.2	GSM398255	Martin_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.8	97.0	GSM398269	HS41-1_3d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.8	97.0	GSM398257	Martin_3d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.7	96.9	GSM398279	Moroc9-75_3d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.5	96.7	GSM398280	Moroc9-75_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.5	96.7	GSM398253	Martin_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.4	96.6	GSM398256	Martin_3d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.4	96.6	GSM398283	Moroc9-75_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.28	4e-56	216	Contig998_x_at	Contig998	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.28	4e-56	216	Contig998_s_at	Contig998	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.04	8e-8	56	Contig873_s_at	Contig873	-	-	2e-121	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.12	1e-6	52	Contig319_at	Contig319	-	-	2e-48	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.16	1e-6	52	HV12F18u_x_at	HV12F18u	-	-	1e-8	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.04	1e-6	52	Contig326_x_at	Contig326	-	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.15	8e-5	46	HVSMEh0081E03r2_at	HVSMEh0081E03r2	-	-	2e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.07	8e-5	46	rbaal31o06_s_at	rbaal31o06	-	-	4e-5	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.11	8e-5	46	Contig44_s_at	Contig44	-	-	3e-23	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	4e-2	38	Arabidopsis thaliana	At5g02500	831020	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	encodes a member of heat shock protein 70 family.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	5e-2	38	Glycine max	GmaAffx.44555.1.S1_s_at	BE584146	-	-	3e+0	At5g37415	sequence-specific DNA binding / transcription factor	C.G.	S.X.	Please select
0.19	3e-7	56	Oryza sativa	Os.38581.1.S1_s_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.06	5e-2	38	Populus trichocarpa	PtpAffx.249.167.S1_at	CV229731	hypothetical protein	-	4e-13	At3g09440	heat shock cognate 70 kDa protein 3 (HSC70-3) (HSP70-3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.16	5e-14	77	Triticum aestivum	Ta.23807.8.S1_x_at	BJ306768	-	-	5e-62	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select
0.04	7e-1	32	Vitis vinifera	1616876_at	CF512794	hypothetical protein LOC100241896	-	1e-12	At3g27925	DEGP1 (DegP protease 1)	C.G.	S.X.	Please select
0.11	7e-8	56	Zea mays	Zm.3081.2.A1_a_at	CF626654	heat shock protein1	-	4e-13	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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