Gene omics information

Query gene ID	HVSMEk0004C11r2_s_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HVSMEk0004C11r2_s_at	HVSMEk0004C11r2	-	-	2e+0	At1g35365	unknown protein	S.X.	H.G.	Please select
0.44	58.9	Contig4591_at	Contig4591	-	-	4e-2	At4g22890	PGR5-LIKE A	S.X.	H.G.	Please select
0.33	42.6	Contig9703_at	Contig9703	-	-	3e+0	At2g37200	integral membrane protein, putative	S.X.	H.G.	Please select
0.31	38.6	HZ49P22r_s_at	HZ49P22r	-	-	9e-1	At5g42825	unknown protein	S.X.	H.G.	Please select
0.11	9.4	HY04M24u_s_at	HY04M24u	-	-	1e-2	At1g54217	Expressed protein	S.X.	H.G.	Please select
0.01	1.1	Contig13507_at	Contig13507	-	-	2e+0	At4g24370	unknown protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
15.1	99.5	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
13.6	99.5	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
10.0	99.1	GSM215728	gibberellin treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
8.1	98.7	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
7.9	98.7	GSM215727	Control (DMSO) treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
7.6	98.6	GSM440966	Stressed palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
7.1	98.4	GSM282024	Malting_day4_Merit_rep2	GSE11200	Expression data from malting barley seeds
7.1	98.4	GSM282022	Malting_day4_Merit_rep4	GSE11200	Expression data from malting barley seeds
6.7	98.3	GSM215730	Control (DMSO) treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
6.3	98.1	GSM282023	Malting_day4_Merit_rep3	GSE11200	Expression data from malting barley seeds

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.51	2e-110	397	Contig18528_at	Contig18528	-	-	6e+0	At5g19151	unknown protein	C.G.	S.X.	Please select
0.56	3e-103	373	HT05J04u_s_at	HT05J04u	-	-	4e+0	At5g51170	unknown protein	C.G.	S.X.	Please select
0.03	7e-2	36	Contig24757_at	Contig24757	-	-	2e-37	At5g24850	CRY3 (cryptochrome 3)	C.G.	S.X.	Please select
0.03	1e+0	32	Contig12128_at	Contig12128	-	-	1e+0	At3g12480	NF-YC11 (NUCLEAR FACTOR Y, SUBUNIT C11)	C.G.	S.X.	Please select
0.03	1e+0	32	Contig21053_at	Contig21053	-	-	3e-2	At5g05230	ubiquitin-protein ligase	C.G.	S.X.	Please select
0.02	1e+0	32	Contig12127_s_at	Contig12127	-	-	2e-1	At5g26617	-	C.G.	S.X.	Please select
0.02	1e+0	32	Contig10856_at	Contig10856	-	-	2e-4	At5g13560	unknown protein	C.G.	S.X.	Please select
0.03	5e+0	30	HO02C20S_at	HO02C20S	-	-	1e+0	At2g20390	unknown protein	C.G.	S.X.	Please select
0.02	5e+0	30	Contig15603_at	Contig15603	-	-	2e-1	At1g67990	TSM1	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e+0	32	Arabidopsis thaliana	At1g35365	840426	unknown protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.05	3e+0	32	Glycine max	GmaAffx.4851.1.S1_at	BI944050	-	-	2e+0	At2g01400	unknown protein	C.G.	S.X.	Please select
0.03	1e+0	34	Oryza sativa	Os06g0137100	CA767165	-	Kinesin, motor region domain containing protein	5e+0	At3g01440	oxygen evolving enhancer 3 (PsbQ) family protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.04	3e+0	32	Populus trichocarpa	PtpAffx.152546.1.S1_at	CX178243	-	-	1e+0	At4g25720	QC (GLUTAMINYL CYCLASE)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.35	3e-24	111	Triticum aestivum	Ta.1715.1.A1_at	BE444161	-	-	1e+0	At5g42300	UBL5 (UBIQUITIN-LIKE PROTEIN 5)	C.G.	S.X.	Please select
0.05	2e-1	34	Vitis vinifera	1614688_at	CF204022.1	-	-	2e+0	At1g14315	-	C.G.	S.X.	Please select
0.04	4e+0	30	Zea mays	ZmAffx.823.1.S1_at	AI770503	-	-	1e-5	At3g07080	membrane protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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