CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID HVSMEk0002N06r2_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 88.7 HVSMEk0002N06r2_at HVSMEk0002N06r2 - - 2e+1 At5g63280 zinc finger (C2H2 type) family protein S.X. H.G.
0.50 66.9 Contig3914_s_at Contig3914 - - 5e-5 At2g47520 AP2 domain-containing transcription factor, putative S.X. H.G.
0.39 50.5 HVSMEk0002P01f_x_at HVSMEk0002P01f - - 4e+0 At5g60960 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.15 14.1 Contig4516_at Contig4516 - - 5e-11 At2g22540 SVP (SHORT VEGETATIVE PHASE) S.X. H.G.
0.10 8.4 Contig4515_at Contig4515 - - 4e-3 At1g53210 sodium/calcium exchanger family protein / calcium-binding EF hand family protein S.X. H.G.
0.04 3.4 Contig131_at Contig131 - - 1e-21 At5g59690 histone H4 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.4 99.6 GSM398270 HS41-1_5d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.2 98.7 GSM398267 HS41-1_3d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
8.0 98.7 GSM398264 HS41-1_1d_rep1 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.5 98.6 GSM398269 HS41-1_3d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.4 98.5 GSM398262 HS41-1_0d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.0 98.4 GSM398282 Moroc9-75_5d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
7.0 98.4 GSM398265 HS41-1_1d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.8 98.3 GSM398266 HS41-1_1d_rep3 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.5 98.2 GSM398268 HS41-1_3d_rep2 GSE15970 Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.9 97.9 GSM363463 5 mM B(OH)3 treatment (5B) - rep1 GSE14521 Late response to boron toxicity in barley leaves
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-1 34 HVSMEa0012J22r2_at HVSMEa0012J22r2 - - 2e-4 At1g48420 D-CDES (D-CYSTEINE DESULFHYDRASE) C.G. S.X.
0.04 5e-1 34 HVSMEa0012J22r2_x_at HVSMEa0012J22r2 - - 2e-4 At1g48420 D-CDES (D-CYSTEINE DESULFHYDRASE) C.G. S.X.
0.02 2e+0 32 Contig26273_at Contig26273 - - 2e-15 At5g67320 HOS15 (high expression of osmotically responsive genes 15) C.G. S.X.
0.03 2e+0 32 Contig1924_at Contig1924 - - 3e-1 At4g25020 KOW domain-containing protein / D111/G-patch domain-containing protein C.G. S.X.
0.01 2e+0 32 Contig5985_at Contig5985 - - 1e-3 At3g50590 nucleotide binding C.G. S.X.
0.02 2e+0 32 Contig2928_s_at Contig2928 - - 7e-32 At5g09660 PMDH2 (peroxisomal NAD-malate dehydrogenase 2) C.G. S.X.
0.03 8e+0 30 Contig3903_x_at Contig3903 hypothetical protein LOC732694 - 3e+0 At1g65150 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
0.03 8e+0 30 Contig3903_at Contig3903 hypothetical protein LOC732694 - 3e+0 At1g65150 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
0.04 8e+0 30 Contig1469_x_at Contig1469 - - 1e+1 At5g50410 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+1 30 Arabidopsis thaliana At5g63280 836448 zinc finger (C2H2 type) family protein F:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:endomembrane system, intracellular;MPO - - - C.G. S.X.
0.04 1e+0 34 Glycine max GmaAffx.17635.1.S1_at BF325380 - - 3e+0 At4g17930 unknown protein C.G. S.X.
0.05 4e-14 79 Oryza sativa Os02g0658500 AK107591.1 - Hypothetical protein 5e-1 At5g07670 F-box family protein C.G. S.X.
0.04 3e-1 36 Populus trichocarpa PtpAffx.144157.1.S1_at CK105988 - - 5e+0 At4g07350 unknown protein C.G. S.X.
0.05 4e+0 32 Triticum aestivum TaAffx.59371.1.S1_at CA601995 - - 8e+0 At5g39010 unknown protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1607318_a_at CB981590 hypothetical protein LOC100264625 - 2e-1 At1g25520 unknown protein C.G. S.X.
0.03 4e-1 34 Zea mays Zm.9628.1.A1_at BM334112 - - 3e-1 At4g27652 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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