Gene omics information

Query gene ID HVSMEh0080L10r2_x_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6077.3HVSMEh0080L10r2_x_atHVSMEh0080L10r2--6e-11At3g54890LHCA1S.X.H.G.
0.6178.7Contig7336_s_atContig7336--5e+0At3g26520TIP2 (TONOPLAST INTRINSIC PROTEIN 2)S.X.H.G.
0.5674.3HW04B18u_s_atHW04B18u--8e+0At5g09560KH domain-containing proteinS.X.H.G.
0.4661.0Contig5326_atContig5326--2e-11At4g38600KAK (KAKTUS)S.X.H.G.
0.4053.1Contig19984_atContig19984--2e+0At1g75800pathogenesis-related thaumatin family proteinS.X.H.G.
0.3240.3Contig7047_atContig7047--7e-2At5g03660unknown proteinS.X.H.G.
0.3037.0rbaak32b03_s_atrbaak32b03--4e-13At3g63520CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
21.299.7GSM261052Bonus Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
15.499.6GSM261058Xantha b-12 Cotrol rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
15.399.6GSM261051Bonus Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
15.099.5GSM372940genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
14.399.5GSM372958genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
13.899.5GSM261050Bonus Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
13.299.4GSM372997genotype: 11542 - pathogen isolates: K1 - time: 8 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.599.4GSM372974genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
12.399.4GSM372939genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
11.999.3GSM372992genotype: 11542 - pathogen isolates: K1 - time: 0 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.507e-154541Contig1208_s_atContig1208--7e-22At3g54890LHCA1C.G.S.X.
0.832e-132470HV14N20u_x_atHV14N20u--1e-8At3g54890LHCA1C.G.S.X.
0.832e-132470HV14N20u_atHV14N20u--1e-8At3g54890LHCA1C.G.S.X.
0.379e-33139HV_CEb0017F03r2_s_atHV_CEb0017F03r2light-harvesting complex I-2e-11At3g54890LHCA1C.G.S.X.
0.044e-754Contig1815_atContig1815--1e-11At1g61520LHCA3C.G.S.X.
0.054e-444Contig168_atContig168--9e-14At4g10340LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5)C.G.S.X.
0.034e-444Contig820_atContig820--4e-24At4g10340LHCB5 (LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5)C.G.S.X.
0.062e-342Contig1529_atContig1529--3e-24At3g61470LHCA2C.G.S.X.
0.046e-340X12735_atX12735--8e-34At2g34420LHB1B2C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.236e-1167Arabidopsis thalianaAt3g54890824654LHCA1Encodes a component of the light harvesting complex associated with photosystem I.---C.G.S.X.
0.041e+034Glycine maxGmaAffx.69688.6.S1_s_atCA935054--2e-24At3g47470LHCA4 (LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4)C.G.S.X.
0.157e-40165Oryza sativaOs01g0124000AK060800.1-Bowman Birk trypsin inhibitor4e-9At3g54890LHCA1C.G.S.X.
0.083e-756Populus trichocarpaPtp.5232.1.S1_atCF936634light-harvesting complex I protein Lhca1-4e-48At3g54890LHCA1C.G.S.X.
0.827e-131466Triticum aestivumTa.12572.1.A1_x_atBQ243633--1e-2At3g54890LHCA1C.G.S.X.
0.136e-236Vitis vinifera1619903_atCD720479hypothetical protein LOC100263275-8e-71At3g54890LHCA1C.G.S.X.
0.206e-43173Zea maysZm.14486.1.A1_atAI964508chlorophyll a-b binding protein 6A-6e-7At3g54890LHCA1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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