CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID HVSMEg0010K10r2_at

Gene name

Organism Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.1 HVSMEg0010K10r2_at HVSMEg0010K10r2 - - 9e-1 At5g52200 unknown protein S.X. H.G.
0.67 84.7 ChlorContig6_at ChlorContig6 - - 3e+0 At1g05990 calcium-binding protein, putative S.X. H.G.
0.55 72.0 HVSMEi0017H19r2_s_at HVSMEi0017H19r2 - - 2e+0 At3g07890 RabGAP/TBC domain-containing protein S.X. H.G.
0.10 8.4 HVSMEb0001J09r2_x_at HVSMEb0001J09r2 - - 7e+0 At5g45710 RHA1 (ROOT HANDEDNESS 1) S.X. H.G.
0.04 3.4 HV_CEa0002J17f2_x_at HV_CEa0002J17f2 - - 3e+0 At5g43480 unknown protein S.X. H.G.
0.02 1.8 HS06P18u_at HS06P18u - - 5e-1 At3g22630 PBD1 (20S PROTEASOME BETA SUBUNIT D1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
9.9 99.1 GSM261064 Xantha s-46 Control rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.7 98.9 GSM261076 Albina e-16 Control rep3 GSE10332 Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
8.6 98.8 GSM282036 Malting_steeped_Morex_rep2 GSE11200 Expression data from malting barley seeds
6.9 98.3 GSM440960 Stressed lemma_Rep1 GSE17669 Gene expression in the barley spike during drought stress
6.5 98.2 GSM282033 Malting_day4_Harrington_rep4 GSE11200 Expression data from malting barley seeds
6.4 98.1 GSM440966 Stressed palea_Rep1 GSE17669 Gene expression in the barley spike during drought stress
6.1 98.0 GSM160826 19% SWC rep3 GSE6990 Barley drought stress
5.9 97.9 GSM419977 Palea_Rep3 GSE16754 Comparative transcriptional profiling of organs of the barley spike
5.9 97.9 GSM440965 Control palea_Rep3 GSE17669 Gene expression in the barley spike during drought stress
5.4 97.5 GSM419976 Palea_Rep2 GSE16754 Comparative transcriptional profiling of organs of the barley spike
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 3e-122 436 Contig12988_at Contig12988 - - 5e-1 At5g55970 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.35 1e-115 414 Contig12989_x_at Contig12989 - - 5e-1 At5g55970 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.35 1e-115 414 Contig12989_at Contig12989 - - 5e-1 At5g55970 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.67 2e-101 367 HK03P05r_at HK03P05r - - 4e-3 At2g35860 FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR) C.G. S.X.
0.59 1e-99 361 HVSMEk0017D04r2_at HVSMEk0017D04r2 - - 7e-2 At5g55970 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.72 9e-98 355 HK03J22r_x_at HK03J22r - - 2e-1 At2g20030 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.38 5e-93 339 Contig1497_s_at Contig1497 - - 1e-1 At3g20360 meprin and TRAF homology domain-containing protein / MATH domain-containing protein C.G. S.X.
0.41 8e-92 335 Contig16799_s_at Contig16799 - - 2e+0 At3g12480 NF-YC11 (NUCLEAR FACTOR Y, SUBUNIT C11) C.G. S.X.
0.29 3e-91 333 Contig13209_at Contig13209 - - 6e-1 At4g39070 zinc finger (B-box type) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 9e-1 34 Arabidopsis thaliana At5g52200 835296 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFOPV - - - C.G. S.X.
0.04 1e+0 34 Glycine max GmaAffx.28074.1.S1_at BM094336 - - 9e-3 At4g27310 zinc finger (B-box type) family protein C.G. S.X.
0.04 2e+0 34 Oryza sativa OsAffx.30795.1.S1_at - - - 0 C.G. S.X.
0.06 1e+0 34 Populus trichocarpa PtpAffx.222279.1.S1_x_at pmrna39592 hypothetical protein - 1e-28 Atcg00040 - C.G. S.X.
0.08 1e-2 40 Triticum aestivum Ta.15960.1.S1_at CA502466 - - 1e+0 At2g01340 unknown protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1620592_at CF515947 - - 1e+0 At5g41450 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.04 2e+0 32 Zea mays ZmAffx.929.1.S1_at AI795460 - - 5e-2 At5g17900 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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