Gene omics information

Query gene ID	HVSMEg0002G01r2_x_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.1	HVSMEg0002G01r2_x_at	HVSMEg0002G01r2	-	-	6e+0	At5g39360	EDL2 (EID1-like 2)	S.X.	H.G.	Please select
0.77	90.8	EBro02_SQ008_P15_at	EBro02_SQ008_P15	-	-	1e+1	At5g43211	unknown protein	S.X.	H.G.	Please select
0.71	87.1	V00087.1_at	V00087.1	-	-	3e-1	At5g43525	-	S.X.	H.G.	Please select
0.67	84.7	EBro08_SQ001_H04_at	EBro08_SQ001_H04	-	-	1e+1	At5g23027	unknown protein	S.X.	H.G.	Please select
0.44	58.9	HY06F24u_x_at	HY06F24u	-	-	1e+1	At5g05710	pleckstrin homology (PH) domain-containing protein	S.X.	H.G.	Please select
0.37	47.9	HS05N06r_at	HS05N06r	-	-	9e-1	At1g79110	protein binding / zinc ion binding	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
38.2	99.9	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
17.9	99.7	GSM161221	cold treatment rep3	GSE6993	Barley low temperature stress
15.5	99.6	GSM282037	Malting_day1_Morex_rep2	GSE11200	Expression data from malting barley seeds
13.6	99.5	GSM238414	Endosperm 8DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
13.4	99.4	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
7.3	98.5	GSM161200	cold treatment rep1	GSE6993	Barley low temperature stress
6.9	98.3	GSM261033	Dicktoo-chilling-rep1	GSE10329	Low temperature stress in cv. Dicktoo
6.4	98.1	GSM398262	HS41-1_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
5.3	97.4	GSM431550	pathogen isolates: Polymyxa graminis - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
4.6	96.8	GSM431547	pathogen isolates: Mock - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.92	2e-87	319	HVSMEg0002G01r2_at	HVSMEg0002G01r2	-	-	6e+0	At5g39360	EDL2 (EID1-like 2)	C.G.	S.X.	Please select
0.15	1e-36	151	Contig5507_at	Contig5507	-	-	5e-45	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	C.G.	S.X.	Please select
0.02	2e-1	34	Contig3812_at	Contig3812	-	-	2e-19	At1g09350	AtGolS3 (Arabidopsis thaliana galactinol synthase 3)	C.G.	S.X.	Please select
0.02	3e+0	30	Contig11380_at	Contig11380	-	-	1e-8	At1g64880	ribosomal protein S5 family protein	C.G.	S.X.	Please select
0.03	3e+0	30	Contig17422_at	Contig17422	-	-	2e-6	At5g58440	SNX2a (SORTING NEXIN 2a)	C.G.	S.X.	Please select
0.04	3e+0	30	S0001100013H01F1_at	S0001100013H01F1	-	-	2e+1	At5g23660	MTN3 (Arabidopsis homolog of Medicago truncatula MTN3)	C.G.	S.X.	Please select
0.02	3e+0	30	Contig11863_at	Contig11863	-	-	4e-2	At2g40140	CZF1	C.G.	S.X.	Please select
0.05	3e+0	30	HB15O22r_s_at	HB15O22r	-	-	8e-1	At2g21220	auxin-responsive protein, putative	C.G.	S.X.	Please select
0.10	1e+1	28	S0001100116E08F1_x_at	S0001100116E08F1	-	-	1e+1	At3g29639	-	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	6e+0	30	Arabidopsis thaliana	At5g39360	833932	EDL2 (EID1-like 2)	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.06	2e+0	32	Glycine max	HgAffx.16081.1.S1_at	CB280275	-	-	8e-1	At3g10190	calmodulin, putative	C.G.	S.X.	Please select
0.04	3e+0	32	Oryza sativa	Os.10208.1.S1_at	-	-	-	0			C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	2e+0	32	Populus trichocarpa	PtpAffx.9757.1.A1_at	CK096700	hypothetical protein	-	2e+0	At1g60670	-	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.12	2e-15	81	Triticum aestivum	Ta.5635.1.S1_a_at	BQ578766	-	-	7e-29	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	C.G.	S.X.	Please select
0.06	2e+0	30	Vitis vinifera	1619263_at	CA814227	-	-	2e+0	At2g03933	-	C.G.	S.X.	Please select
0.05	7e-1	32	Zea mays	Zm.8104.1.A1_at	BM072941	-	-	4e+0	At1g04945	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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