Gene omics information

Query gene ID HVSMEg0001N20r2_at
Gene name
Organism Hordeum vulgare


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.1HVSMEg0001N20r2_atHVSMEg0001N20r2--3e+0At4g03050AOP3S.X.H.G.
0.8394.0Contig12402_atContig12402--3e+0At3g05490RALFL22 (ralf-like 22)S.X.H.G.
0.8394.0Contig2041_x_atContig2041--1e+0At3g61310DNA-binding family proteinS.X.H.G.
0.6784.7Contig6006_s_atContig6006--3e+0At1g60830U2 snRNP auxiliary factor large subunit, putativeS.X.H.G.
0.6178.7Contig8898_atContig8898--2e-29At2g25570bindingS.X.H.G.
0.6077.3Contig2041_atContig2041--1e+0At3g61310DNA-binding family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
5.597.6GSM238426Endosperm 72 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.497.5GSM238423Endosperm 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
5.497.5GSM238420Endosperm 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
5.397.4GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seeds
4.696.8GSM238425Endosperm 48 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grains
4.496.6GSM372967genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.396.4GSM282025Control_dryseed_Morex_rep1GSE11200Expression data from malting barley seeds
4.296.3GSM238424Endosperm 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grains
3.995.8GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seeds
3.795.5GSM372963genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-134Contig21185_atContig21185--4e-1At3g24710-C.G.S.X.
0.012e+032Contig4155_atContig4155--2e-38At5g54310AGD5 (ARF-GAP domain 5)C.G.S.X.
0.042e+032Contig20663_atContig20663--5e-1Atmg01310-C.G.S.X.
0.032e+032Contig18828_atContig18828--6e+0At5g45690unknown proteinC.G.S.X.
0.022e+032Contig16713_atContig16713--2e+0At5g54460wound-responsive protein-relatedC.G.S.X.
0.012e+032Contig3612_atContig3612glucose-6-phosphate isomerase-3e-41At5g42740glucose-6-phosphate isomerase, cytosolic (PGIC)C.G.S.X.
0.027e+030Contig8276_atContig8276--2e+0At3g54290-C.G.S.X.
0.037e+030Contig4401_atContig4401--1e-19At4g20150unknown proteinC.G.S.X.
0.037e+030HVSMEk0009E14r2_atHVSMEk0009E14r2--7e-2At4g35770SEN1 (SENESCENCE 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+032Arabidopsis thalianaAt4g03050828104AOP3Transcriptional silent in leaf tissues of ecotype Col. The transcribed allele in ecotype Ler encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of hydroxyalkyl glucosinolates among different ecotypes of Arabidopsis.---C.G.S.X.
0.045e+032Glycine maxGmaAffx.67662.1.A1_atBE660481--3e+0At4g27740-C.G.S.X.
0.033e+130Oryza sativaOsAffx.28153.1.S1_at---0C.G.S.X.
0.045e+032Populus trichocarpaPtpAffx.106329.1.A1_atDN486877--8e-1At4g02910unknown proteinC.G.S.X.
0.044e+032Triticum aestivumTaAffx.106009.1.S1_atCA726450--8e-1At5g01370unknown proteinC.G.S.X.
0.034e+030Vitis vinifera1614893_atCF568825--1e-3At1g78950beta-amyrin synthase, putativeC.G.S.X.
0.032e+032Zea maysZm.2925.3.A1_atCF002413Ubiquitin-4e-41At2g47110UBQ6C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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