Gene omics information

Query gene ID	HVSMEf0010L07r2_at
Gene name
Organism	Hordeum vulgare

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.57	74.9	HVSMEf0010L07r2_at	HVSMEf0010L07r2	-	-	7e+0	At5g08480	VQ motif-containing protein	S.X.	H.G.	Please select
0.37	47.9	Contig10564_at	Contig10564	-	-	5e-1	At1g51090	heavy-metal-associated domain-containing protein	S.X.	H.G.	Please select
0.31	38.6	Contig7157_at	Contig7157	-	-	2e-11	At2g24500	FZF	S.X.	H.G.	Please select
0.29	35.5	Contig411_at	Contig411	-	-	0	At5g19780	TUA5	S.X.	H.G.	Please select
0.29	35.5	Contig2595_at	Contig2595	Sec61 alpha subunit	-	2e-69	At1g29310	P-P-bond-hydrolysis-driven protein transmembrane transporter	S.X.	H.G.	Please select
0.29	35.5	Contig1820_at	Contig1820	-	-	8e-3	At2g15490	UGT73B4 (UDP-GLYCOSYLTRANSFERASE 73B4)	S.X.	H.G.	Please select
0.07	5.8	Contig2616_at	Contig2616	-	-	2e+0	At5g11990	proline-rich family protein	S.X.	H.G.	Please select
0.04	3.4	Contig16086_at	Contig16086	-	-	6e-3	At4g39720	VQ motif-containing protein	S.X.	H.G.	Please select

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
74.8	100.0	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
64.9	100.0	GSM398251	Martin_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
12.6	99.4	GSM71154	Morex stress and unstress replicate 1	GSE3170	Barley single feature polymorphisms and drought stress gene expression
11.4	99.3	GSM311249	28-4_without_aphids_1	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
8.4	98.8	GSM311260	kara_with_aphids_2	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
8.3	98.8	GSM130806	JA and salinity stress, biological rep2	GSE5605	Expression data from barley under salinity stress and JA treatment
8.2	98.7	GSM431570	pathogen isolates: Mock inoculated control - rep3	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
7.6	98.6	GSM382233	Root_Hg2	GSE15295	Mercury toxicity in barley roots
7.0	98.4	GSM398253	Martin_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
6.0	97.9	GSM419980	Awn_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.35	1e-36	151	Contig2822_s_at	Contig2822	-	-	6e-3	At3g18410	NADH-ubiquinone oxidoreductase-related	C.G.	S.X.	Please select
0.40	1e-36	151	HVSMEl0002I19r2_at	HVSMEl0002I19r2	-	-	5e-3	At3g18410	NADH-ubiquinone oxidoreductase-related	C.G.	S.X.	Please select
0.03	4e+0	30	HVSMEn0016L17r2_at	HVSMEn0016L17r2	-	-	1e-3	At1g20850	XCP2 (xylem cysteine peptidase 2)	C.G.	S.X.	Please select
0.02	1e+1	28	Contig19678_at	Contig19678	-	-	1e-35	At4g02390	APP (ARABIDOPSIS POLY(ADP-RIBOSE) POLYMERASE)	C.G.	S.X.	Please select
0.01	1e+1	28	Contig10424_at	Contig10424	-	-	2e-14	At3g49350	RAB GTPase activator	C.G.	S.X.	Please select
0.01	1e+1	28	Contig10101_at	Contig10101	-	-	2e-1	At1g66080	unknown protein	C.G.	S.X.	Please select
0.03	1e+1	28	HX06L03r_at	HX06L03r	-	-	5e+0	At3g46613	RTFL4 (ROTUNDIFOLIA LIKE 4)	C.G.	S.X.	Please select
0.02	1e+1	28	Contig16211_at	Contig16211	-	-	2e+0	At2g22800	HAT9	C.G.	S.X.	Please select
0.07	1e+1	28	HD13L20r_s_at	HD13L20r	-	-	9e-1	At3g46613	RTFL4 (ROTUNDIFOLIA LIKE 4)	C.G.	S.X.	Please select

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	7e+0	30	Arabidopsis thaliana	At5g08480	830747	VQ motif-containing protein	F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.07	2e-1	36	Glycine max	Gma.15206.1.S1_at	BI471061	-	-	2e+0	At4g29670	thioredoxin family protein	C.G.	S.X.	Please select
0.04	4e+0	32	Oryza sativa	Os01g0965300	AK111057.1	-	Hypothetical protein	5e+0	At5g28800	unknown protein	C.G.	S.X.	Please selectath,osa KEGG (integral)ath,osa Gramene (integral)ath,osa KaPPA-View 4 (pathway)
0.05	3e+0	32	Populus trichocarpa	PtpAffx.220052.1.S1_at	pmrna36326	hypothetical protein	-	6e-4	At2g35215	unknown protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.13	1e-4	46	Triticum aestivum	Ta.3169.1.S1_x_at	CD938596	-	-	2e+0	At3g18410	NADH-ubiquinone oxidoreductase-related	C.G.	S.X.	Please select
0.08	6e-1	32	Vitis vinifera	1619607_s_at	CF202338.1	hypothetical protein LOC100242775	-	7e-3	At4g11020	unknown protein	C.G.	S.X.	Please select
0.07	1e+1	28	Zea mays	ZmAffx.150.1.A1_at	AI667840	hypothetical protein LOC100193164	-	1e+1	At5g52605	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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